JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3mqda1.name2015-04-17 16:26 0 Job name flag file
[ ]jp_w169IAq.align2015-04-17 18:13 230KPSIBLAST alignment in FASTA format
[TXT]jp_w169IAq.als2015-04-17 18:13 3.5KAlscript command file for PS/PDF output
[ ]jp_w169IAq.blast.gz2015-04-17 18:10 19MCompressed PSIBLAST output file
[TXT]jp_w169IAq.coils.csv2015-04-17 18:13 1.5KCOILS output in CSV format
[ ]jp_w169IAq.coilseq.lupas_142015-04-17 18:13 10KCOILS output, window length 14
[ ]jp_w169IAq.coilseq.lupas_212015-04-17 18:13 10KCOILS output, window length 21
[ ]jp_w169IAq.coilseq.lupas_282015-04-17 18:13 10KCOILS output, window length 28
[ ]jp_w169IAq.concise2015-04-17 18:13 456KPrediction: coiled-coil, solvent, alignment
[ ]jp_w169IAq.concise.blc2015-04-17 18:13 230KBLC format prediction and alignment data
[ ]jp_w169IAq.concise.fasta2015-04-17 18:13 233KPrediction: coiled-coil, solvent, alignment
[ ]jp_w169IAq.concise.pdf2015-04-17 18:14 1.5MPDF prediction and alignment data
[ ]jp_w169IAq.concise.ps2015-04-17 18:14 28MPrediction: coiled-coil, solvent, alignment
[ ]jp_w169IAq.fasta2015-04-17 16:59 265 Input query sequence in FASTA format
[ ]jp_w169IAq.full_MSA.fasta2015-04-17 18:12 32MFull MSA before JPred filters in FASTA
[TXT]jp_w169IAq.full_MSA.fasta.noGaps.html2015-04-17 18:15 4.8MFull MSA before JPred filters in FASTA
[TXT]jp_w169IAq.full_MSA.fasta.withGaps.html2015-04-17 18:15 92MFull MSA before JPred filters in FASTA
[ ]jp_w169IAq.hmm2015-04-17 18:13 47KHHMer2 profile of the alignment
[TXT]jp_w169IAq.html2015-04-17 18:13 418KHTML prediction and alignment data
[ ]jp_w169IAq.input2015-04-17 16:26 256 Raw input data for analysis
[ ]jp_w169IAq.jalview2015-04-17 18:13 5.8KJalview annotation file for alignment
[ ]jp_w169IAq.jnet2015-04-17 18:13 9.1KJnet secondary structure output
[TXT]jp_w169IAq.profile2015-04-17 17:53 40KPSIBLAST profile from alignment
[ ]jp_w169IAq.pssm2015-04-17 18:13 53KPSIBLAST PSSM for Jnet
[TXT]jp_w169IAq.results.html2016-02-15 12:21 108KJPred results page
[TXT]jp_w169IAq.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_w169IAq.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_w169IAq.seq2015-04-17 16:26 265 Sequence data file
[TXT]jp_w169IAq.simple.html2015-04-17 18:13 1.8KBrief HTML: sequence and prediction only
[TXT]jp_w169IAq.svg.html2015-04-17 18:15 100KJalview SVG summary of results
[ ]jp_w169IAq.tar.gz2015-04-17 18:15 31MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.