JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3n4ja_.name2015-04-17 16:27 0 Job name flag file
[ ]jp_N3bzRMP.align2015-04-17 17:08 150KPSIBLAST alignment in FASTA format
[TXT]jp_N3bzRMP.als2015-04-17 17:08 3.1KAlscript command file for PS/PDF output
[ ]jp_N3bzRMP.blast.gz2015-04-17 17:07 7.7MCompressed PSIBLAST output file
[TXT]jp_N3bzRMP.coils.csv2015-04-17 17:08 1.0KCOILS output in CSV format
[ ]jp_N3bzRMP.coilseq.lupas_142015-04-17 17:08 6.8KCOILS output, window length 14
[ ]jp_N3bzRMP.coilseq.lupas_212015-04-17 17:08 6.8KCOILS output, window length 21
[ ]jp_N3bzRMP.coilseq.lupas_282015-04-17 17:08 6.8KCOILS output, window length 28
[ ]jp_N3bzRMP.concise2015-04-17 17:08 293KPrediction: coiled-coil, solvent, alignment
[ ]jp_N3bzRMP.concise.blc2015-04-17 17:08 150KBLC format prediction and alignment data
[ ]jp_N3bzRMP.concise.fasta2015-04-17 17:08 151KPrediction: coiled-coil, solvent, alignment
[ ]jp_N3bzRMP.concise.pdf2015-04-17 17:08 1.0MPDF prediction and alignment data
[ ]jp_N3bzRMP.concise.ps2015-04-17 17:08 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_N3bzRMP.fasta2015-04-17 17:00 176 Input query sequence in FASTA format
[ ]jp_N3bzRMP.full_MSA.fasta2015-04-17 17:07 17MFull MSA before JPred filters in FASTA
[TXT]jp_N3bzRMP.full_MSA.fasta.noGaps.html2015-04-17 17:09 2.8MFull MSA before JPred filters in FASTA
[TXT]jp_N3bzRMP.full_MSA.fasta.withGaps.html2015-04-17 17:09 47MFull MSA before JPred filters in FASTA
[ ]jp_N3bzRMP.hmm2015-04-17 17:08 30KHHMer2 profile of the alignment
[TXT]jp_N3bzRMP.html2015-04-17 17:08 326KHTML prediction and alignment data
[ ]jp_N3bzRMP.input2015-04-17 16:27 168 Raw input data for analysis
[ ]jp_N3bzRMP.jalview2015-04-17 17:08 4.0KJalview annotation file for alignment
[ ]jp_N3bzRMP.jnet2015-04-17 17:08 5.9KJnet secondary structure output
[TXT]jp_N3bzRMP.profile2015-04-17 17:05 26KPSIBLAST profile from alignment
[ ]jp_N3bzRMP.pssm2015-04-17 17:08 35KPSIBLAST PSSM for Jnet
[TXT]jp_N3bzRMP.results.html2016-02-15 12:21 75KJPred results page
[TXT]jp_N3bzRMP.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_N3bzRMP.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_N3bzRMP.seq2015-04-17 16:27 176 Sequence data file
[TXT]jp_N3bzRMP.simple.html2015-04-17 17:08 1.5KBrief HTML: sequence and prediction only
[TXT]jp_N3bzRMP.svg.html2015-04-17 17:09 67KJalview SVG summary of results
[ ]jp_N3bzRMP.tar.gz2015-04-17 17:09 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.