JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:58 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ntua1.name2015-04-17 19:21 0 Job name flag file
[ ]jp_HVbTMHZ.align2015-04-17 21:58 69KPSIBLAST alignment in FASTA format
[TXT]jp_HVbTMHZ.als2015-04-17 21:58 1.8KAlscript command file for PS/PDF output
[ ]jp_HVbTMHZ.blast.gz2015-04-17 21:58 467KCompressed PSIBLAST output file
[TXT]jp_HVbTMHZ.coils.csv2015-04-17 21:58 390 COILS output in CSV format
[ ]jp_HVbTMHZ.coilseq.lupas_142015-04-17 21:58 2.5KCOILS output, window length 14
[ ]jp_HVbTMHZ.coilseq.lupas_212015-04-17 21:58 2.5KCOILS output, window length 21
[ ]jp_HVbTMHZ.coilseq.lupas_282015-04-17 21:58 2.5KCOILS output, window length 28
[ ]jp_HVbTMHZ.concise2015-04-17 21:58 130KPrediction: coiled-coil, solvent, alignment
[ ]jp_HVbTMHZ.concise.blc2015-04-17 21:58 69KBLC format prediction and alignment data
[ ]jp_HVbTMHZ.concise.fasta2015-04-17 21:58 70KPrediction: coiled-coil, solvent, alignment
[ ]jp_HVbTMHZ.concise.pdf2015-04-17 21:58 407KPDF prediction and alignment data
[ ]jp_HVbTMHZ.concise.ps2015-04-17 21:58 7.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_HVbTMHZ.fasta2015-04-17 21:51 73 Input query sequence in FASTA format
[ ]jp_HVbTMHZ.full_MSA.fasta2015-04-17 21:58 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_HVbTMHZ.full_MSA.fasta.noGaps.html2015-04-17 21:58 872KFull MSA before JPred filters in FASTA
[TXT]jp_HVbTMHZ.full_MSA.fasta.withGaps.html2015-04-17 21:58 7.1MFull MSA before JPred filters in FASTA
[ ]jp_HVbTMHZ.hmm2015-04-17 21:58 11KHHMer2 profile of the alignment
[TXT]jp_HVbTMHZ.html2015-04-17 21:58 248KHTML prediction and alignment data
[ ]jp_HVbTMHZ.input2015-04-17 19:21 67 Raw input data for analysis
[ ]jp_HVbTMHZ.jalview2015-04-17 21:58 2.0KJalview annotation file for alignment
[ ]jp_HVbTMHZ.jnet2015-04-17 21:58 2.3KJnet secondary structure output
[TXT]jp_HVbTMHZ.profile2015-04-17 21:55 10KPSIBLAST profile from alignment
[ ]jp_HVbTMHZ.pssm2015-04-17 21:58 13KPSIBLAST PSSM for Jnet
[TXT]jp_HVbTMHZ.results.html2016-02-15 12:21 35KJPred results page
[TXT]jp_HVbTMHZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_HVbTMHZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_HVbTMHZ.seq2015-04-17 19:21 73 Sequence data file
[TXT]jp_HVbTMHZ.simple.html2015-04-17 21:58 1.1KBrief HTML: sequence and prediction only
[TXT]jp_HVbTMHZ.svg.html2015-04-17 21:58 27KJalview SVG summary of results
[ ]jp_HVbTMHZ.tar.gz2015-04-17 21:58 1.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.