JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:06 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3orsa_.name2015-04-17 18:53 0 Job name flag file
[ ]jp_mbIbBQX.align2015-04-17 21:05 113KPSIBLAST alignment in FASTA format
[TXT]jp_mbIbBQX.als2015-04-17 21:05 2.8KAlscript command file for PS/PDF output
[ ]jp_mbIbBQX.blast.gz2015-04-17 21:04 1.6MCompressed PSIBLAST output file
[TXT]jp_mbIbBQX.coils.csv2015-04-17 21:05 1.0KCOILS output in CSV format
[ ]jp_mbIbBQX.coilseq.lupas_142015-04-17 21:05 6.8KCOILS output, window length 14
[ ]jp_mbIbBQX.coilseq.lupas_212015-04-17 21:05 6.8KCOILS output, window length 21
[ ]jp_mbIbBQX.coilseq.lupas_282015-04-17 21:05 6.8KCOILS output, window length 28
[ ]jp_mbIbBQX.concise2015-04-17 21:05 223KPrediction: coiled-coil, solvent, alignment
[ ]jp_mbIbBQX.concise.blc2015-04-17 21:05 113KBLC format prediction and alignment data
[ ]jp_mbIbBQX.concise.fasta2015-04-17 21:05 115KPrediction: coiled-coil, solvent, alignment
[ ]jp_mbIbBQX.concise.pdf2015-04-17 21:05 761KPDF prediction and alignment data
[ ]jp_mbIbBQX.concise.ps2015-04-17 21:05 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_mbIbBQX.fasta2015-04-17 21:00 176 Input query sequence in FASTA format
[ ]jp_mbIbBQX.full_MSA.fasta2015-04-17 21:05 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_mbIbBQX.full_MSA.fasta.noGaps.html2015-04-17 21:05 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_mbIbBQX.full_MSA.fasta.withGaps.html2015-04-17 21:05 11MFull MSA before JPred filters in FASTA
[ ]jp_mbIbBQX.hmm2015-04-17 21:05 30KHHMer2 profile of the alignment
[TXT]jp_mbIbBQX.html2015-04-17 21:05 253KHTML prediction and alignment data
[ ]jp_mbIbBQX.input2015-04-17 18:53 168 Raw input data for analysis
[ ]jp_mbIbBQX.jalview2015-04-17 21:05 4.1KJalview annotation file for alignment
[ ]jp_mbIbBQX.jnet2015-04-17 21:05 5.9KJnet secondary structure output
[TXT]jp_mbIbBQX.profile2015-04-17 21:02 26KPSIBLAST profile from alignment
[ ]jp_mbIbBQX.pssm2015-04-17 21:05 35KPSIBLAST PSSM for Jnet
[TXT]jp_mbIbBQX.results.html2016-02-15 12:21 74KJPred results page
[TXT]jp_mbIbBQX.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mbIbBQX.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mbIbBQX.seq2015-04-17 18:53 176 Sequence data file
[TXT]jp_mbIbBQX.simple.html2015-04-17 21:05 1.4KBrief HTML: sequence and prediction only
[TXT]jp_mbIbBQX.svg.html2015-04-17 21:06 66KJalview SVG summary of results
[ ]jp_mbIbBQX.tar.gz2015-04-17 21:06 3.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.