JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d3osea_.name2015-04-17 17:42 0 Job name flag file
[ ]jp_9FkZ2JO.input2015-04-17 17:42 107 Raw input data for analysis
[ ]jp_9FkZ2JO.fasta2015-04-17 19:04 114 Input query sequence in FASTA format
[ ]jp_9FkZ2JO.seq2015-04-17 17:42 114 Sequence data file
[TXT]jp_9FkZ2JO.coils.csv2015-04-17 19:07 630 COILS output in CSV format
[TXT]jp_9FkZ2JO.simple.html2015-04-17 19:07 1.2KBrief HTML: sequence and prediction only
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_9FkZ2JO.als2015-04-17 19:07 2.3KAlscript command file for PS/PDF output
[ ]jp_9FkZ2JO.jalview2015-04-17 19:07 2.8KJalview annotation file for alignment
[ ]jp_9FkZ2JO.jnet2015-04-17 19:07 3.7KJnet secondary structure output
[ ]jp_9FkZ2JO.coilseq.lupas_142015-04-17 19:07 4.2KCOILS output, window length 14
[ ]jp_9FkZ2JO.coilseq.lupas_212015-04-17 19:07 4.2KCOILS output, window length 21
[ ]jp_9FkZ2JO.coilseq.lupas_282015-04-17 19:07 4.2KCOILS output, window length 28
[TXT]LOG2015-04-17 19:07 4.7KJPred server log file
[TXT]jp_9FkZ2JO.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9FkZ2JO.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_9FkZ2JO.profile2015-04-17 19:06 16KPSIBLAST profile from alignment
[ ]jp_9FkZ2JO.hmm2015-04-17 19:07 19KHHMer2 profile of the alignment
[ ]jp_9FkZ2JO.pssm2015-04-17 19:07 21KPSIBLAST PSSM for Jnet
[ ]jp_9FkZ2JO.align2015-04-17 19:07 42KPSIBLAST alignment in FASTA format
[TXT]jp_9FkZ2JO.svg.html2015-04-17 19:07 42KJalview SVG summary of results
[ ]jp_9FkZ2JO.concise.blc2015-04-17 19:07 42KBLC format prediction and alignment data
[ ]jp_9FkZ2JO.concise.fasta2015-04-17 19:07 43KPrediction: coiled-coil, solvent, alignment
[TXT]jp_9FkZ2JO.results.html2016-02-15 12:21 50KJPred results page
[ ]jp_9FkZ2JO.concise2015-04-17 19:07 83KPrediction: coiled-coil, solvent, alignment
[TXT]jp_9FkZ2JO.html2015-04-17 19:07 121KHTML prediction and alignment data
[TXT]jp_9FkZ2JO.full_MSA.fasta.noGaps.html2015-04-17 19:07 274KFull MSA before JPred filters in FASTA
[ ]jp_9FkZ2JO.concise.pdf2015-04-17 19:07 274KPDF prediction and alignment data
[ ]jp_9FkZ2JO.blast.gz2015-04-17 19:07 482KCompressed PSIBLAST output file
[ ]jp_9FkZ2JO.tar.gz2015-04-17 19:07 1.0MArchive containing complete results
[ ]jp_9FkZ2JO.full_MSA.fasta2015-04-17 19:07 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_9FkZ2JO.full_MSA.fasta.withGaps.html2015-04-17 19:07 3.1MFull MSA before JPred filters in FASTA
[ ]jp_9FkZ2JO.concise.ps2015-04-17 19:07 4.8MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.