JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:10 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3oxpa_.name2015-04-17 15:49 0 Job name flag file
[ ]jp_Git0G9R.align2015-04-17 16:10 169KPSIBLAST alignment in FASTA format
[TXT]jp_Git0G9R.als2015-04-17 16:10 2.8KAlscript command file for PS/PDF output
[ ]jp_Git0G9R.blast.gz2015-04-17 16:09 3.5MCompressed PSIBLAST output file
[TXT]jp_Git0G9R.coils.csv2015-04-17 16:10 918 COILS output in CSV format
[ ]jp_Git0G9R.coilseq.lupas_142015-04-17 16:10 6.2KCOILS output, window length 14
[ ]jp_Git0G9R.coilseq.lupas_212015-04-17 16:10 6.2KCOILS output, window length 21
[ ]jp_Git0G9R.coilseq.lupas_282015-04-17 16:10 6.2KCOILS output, window length 28
[ ]jp_Git0G9R.concise2015-04-17 16:10 329KPrediction: coiled-coil, solvent, alignment
[ ]jp_Git0G9R.concise.blc2015-04-17 16:10 169KBLC format prediction and alignment data
[ ]jp_Git0G9R.concise.fasta2015-04-17 16:10 171KPrediction: coiled-coil, solvent, alignment
[ ]jp_Git0G9R.concise.pdf2015-04-17 16:10 1.2MPDF prediction and alignment data
[ ]jp_Git0G9R.concise.ps2015-04-17 16:10 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_Git0G9R.fasta2015-04-17 16:04 163 Input query sequence in FASTA format
[ ]jp_Git0G9R.full_MSA.fasta2015-04-17 16:09 5.5MFull MSA before JPred filters in FASTA
[TXT]jp_Git0G9R.full_MSA.fasta.noGaps.html2015-04-17 16:10 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_Git0G9R.full_MSA.fasta.withGaps.html2015-04-17 16:10 29MFull MSA before JPred filters in FASTA
[ ]jp_Git0G9R.hmm2015-04-17 16:10 28KHHMer2 profile of the alignment
[TXT]jp_Git0G9R.html2015-04-17 16:10 379KHTML prediction and alignment data
[ ]jp_Git0G9R.input2015-04-17 15:49 155 Raw input data for analysis
[ ]jp_Git0G9R.jalview2015-04-17 16:10 3.8KJalview annotation file for alignment
[ ]jp_Git0G9R.jnet2015-04-17 16:10 5.5KJnet secondary structure output
[TXT]jp_Git0G9R.profile2015-04-17 16:08 24KPSIBLAST profile from alignment
[ ]jp_Git0G9R.pssm2015-04-17 16:10 32KPSIBLAST PSSM for Jnet
[TXT]jp_Git0G9R.results.html2016-02-15 12:21 69KJPred results page
[TXT]jp_Git0G9R.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Git0G9R.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Git0G9R.seq2015-04-17 15:49 163 Sequence data file
[TXT]jp_Git0G9R.simple.html2015-04-17 16:10 1.4KBrief HTML: sequence and prediction only
[TXT]jp_Git0G9R.svg.html2015-04-17 16:10 61KJalview SVG summary of results
[ ]jp_Git0G9R.tar.gz2015-04-17 16:10 8.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.