JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:04 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3pdfa1.name2015-04-17 18:54 0 Job name flag file
[ ]jp_DDFsyYI.align2015-04-17 21:04 16KPSIBLAST alignment in FASTA format
[TXT]jp_DDFsyYI.als2015-04-17 21:04 2.6KAlscript command file for PS/PDF output
[ ]jp_DDFsyYI.blast.gz2015-04-17 21:04 99KCompressed PSIBLAST output file
[TXT]jp_DDFsyYI.coils.csv2015-04-17 21:04 738 COILS output in CSV format
[ ]jp_DDFsyYI.coilseq.lupas_142015-04-17 21:04 5.0KCOILS output, window length 14
[ ]jp_DDFsyYI.coilseq.lupas_212015-04-17 21:04 5.0KCOILS output, window length 21
[ ]jp_DDFsyYI.coilseq.lupas_282015-04-17 21:04 5.0KCOILS output, window length 28
[ ]jp_DDFsyYI.concise2015-04-17 21:04 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_DDFsyYI.concise.blc2015-04-17 21:04 18KBLC format prediction and alignment data
[ ]jp_DDFsyYI.concise.fasta2015-04-17 21:04 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_DDFsyYI.concise.pdf2015-04-17 21:04 110KPDF prediction and alignment data
[ ]jp_DDFsyYI.concise.ps2015-04-17 21:04 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_DDFsyYI.fasta2015-04-17 21:01 132 Input query sequence in FASTA format
[ ]jp_DDFsyYI.full_MSA.fasta2015-04-17 21:04 273KFull MSA before JPred filters in FASTA
[TXT]jp_DDFsyYI.full_MSA.fasta.noGaps.html2015-04-17 21:04 63KFull MSA before JPred filters in FASTA
[TXT]jp_DDFsyYI.full_MSA.fasta.withGaps.html2015-04-17 21:04 767KFull MSA before JPred filters in FASTA
[ ]jp_DDFsyYI.hmm2015-04-17 21:04 22KHHMer2 profile of the alignment
[TXT]jp_DDFsyYI.html2015-04-17 21:04 52KHTML prediction and alignment data
[ ]jp_DDFsyYI.input2015-04-17 18:54 125 Raw input data for analysis
[ ]jp_DDFsyYI.jalview2015-04-17 21:04 3.2KJalview annotation file for alignment
[ ]jp_DDFsyYI.jnet2015-04-17 21:04 4.4KJnet secondary structure output
[TXT]jp_DDFsyYI.profile2015-04-17 21:02 19KPSIBLAST profile from alignment
[ ]jp_DDFsyYI.pssm2015-04-17 21:04 25KPSIBLAST PSSM for Jnet
[TXT]jp_DDFsyYI.results.html2016-02-15 12:21 56KJPred results page
[TXT]jp_DDFsyYI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_DDFsyYI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_DDFsyYI.seq2015-04-17 18:54 132 Sequence data file
[TXT]jp_DDFsyYI.simple.html2015-04-17 21:04 1.3KBrief HTML: sequence and prediction only
[TXT]jp_DDFsyYI.svg.html2015-04-17 21:04 48KJalview SVG summary of results
[ ]jp_DDFsyYI.tar.gz2015-04-17 21:04 329KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.