JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:10 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3q46a_.name2015-04-17 18:17 0 Job name flag file
[ ]jp_az8JQh3.align2015-04-17 20:09 152KPSIBLAST alignment in FASTA format
[TXT]jp_az8JQh3.als2015-04-17 20:09 2.6KAlscript command file for PS/PDF output
[ ]jp_az8JQh3.blast.gz2015-04-17 20:08 2.2MCompressed PSIBLAST output file
[TXT]jp_az8JQh3.coils.csv2015-04-17 20:09 1.1KCOILS output in CSV format
[ ]jp_az8JQh3.coilseq.lupas_142015-04-17 20:09 7.4KCOILS output, window length 14
[ ]jp_az8JQh3.coilseq.lupas_212015-04-17 20:09 7.4KCOILS output, window length 21
[ ]jp_az8JQh3.coilseq.lupas_282015-04-17 20:09 7.4KCOILS output, window length 28
[ ]jp_az8JQh3.concise2015-04-17 20:09 299KPrediction: coiled-coil, solvent, alignment
[ ]jp_az8JQh3.concise.blc2015-04-17 20:09 152KBLC format prediction and alignment data
[ ]jp_az8JQh3.concise.fasta2015-04-17 20:09 154KPrediction: coiled-coil, solvent, alignment
[ ]jp_az8JQh3.concise.pdf2015-04-17 20:10 1.0MPDF prediction and alignment data
[ ]jp_az8JQh3.concise.ps2015-04-17 20:09 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_az8JQh3.fasta2015-04-17 20:06 191 Input query sequence in FASTA format
[ ]jp_az8JQh3.full_MSA.fasta2015-04-17 20:09 4.2MFull MSA before JPred filters in FASTA
[TXT]jp_az8JQh3.full_MSA.fasta.noGaps.html2015-04-17 20:10 846KFull MSA before JPred filters in FASTA
[TXT]jp_az8JQh3.full_MSA.fasta.withGaps.html2015-04-17 20:10 14MFull MSA before JPred filters in FASTA
[ ]jp_az8JQh3.hmm2015-04-17 20:09 33KHHMer2 profile of the alignment
[TXT]jp_az8JQh3.html2015-04-17 20:09 319KHTML prediction and alignment data
[ ]jp_az8JQh3.input2015-04-17 18:17 183 Raw input data for analysis
[ ]jp_az8JQh3.jalview2015-04-17 20:09 4.3KJalview annotation file for alignment
[ ]jp_az8JQh3.jnet2015-04-17 20:09 6.5KJnet secondary structure output
[TXT]jp_az8JQh3.profile2015-04-17 20:08 28KPSIBLAST profile from alignment
[ ]jp_az8JQh3.pssm2015-04-17 20:09 38KPSIBLAST PSSM for Jnet
[TXT]jp_az8JQh3.results.html2016-02-15 12:21 77KJPred results page
[TXT]jp_az8JQh3.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_az8JQh3.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_az8JQh3.seq2015-04-17 18:17 191 Sequence data file
[TXT]jp_az8JQh3.simple.html2015-04-17 20:09 1.5KBrief HTML: sequence and prediction only
[TXT]jp_az8JQh3.svg.html2015-04-17 20:10 69KJalview SVG summary of results
[ ]jp_az8JQh3.tar.gz2015-04-17 20:10 4.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.