A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:13 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3qm9a_.name | 2015-04-17 18:17 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_fOhibbj.align | 2015-04-17 20:13 | 115K | PSIBLAST alignment in FASTA format |
| jp_fOhibbj.als | 2015-04-17 20:13 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_fOhibbj.blast.gz | 2015-04-17 20:12 | 1.1M | Compressed PSIBLAST output file |
| jp_fOhibbj.coils.csv | 2015-04-17 20:13 | 894 | COILS output in CSV format |
| jp_fOhibbj.coilseq.lupas_14 | 2015-04-17 20:13 | 6.0K | COILS output, window length 14 |
| jp_fOhibbj.coilseq.lupas_21 | 2015-04-17 20:13 | 6.0K | COILS output, window length 21 |
| jp_fOhibbj.coilseq.lupas_28 | 2015-04-17 20:13 | 6.0K | COILS output, window length 28 |
| jp_fOhibbj.concise | 2015-04-17 20:13 | 226K | Prediction: coiled-coil, solvent, alignment |
| jp_fOhibbj.concise.blc | 2015-04-17 20:13 | 116K | BLC format prediction and alignment data |
| jp_fOhibbj.concise.fasta | 2015-04-17 20:13 | 117K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_fOhibbj.concise.pdf | 2015-04-17 20:13 | 788K | PDF prediction and alignment data |
| jp_fOhibbj.concise.ps | 2015-04-17 20:13 | 14M | Prediction: coiled-coil, solvent, alignment |
| jp_fOhibbj.fasta | 2015-04-17 20:07 | 159 | Input query sequence in FASTA format |
| jp_fOhibbj.full_MSA.fasta | 2015-04-17 20:12 | 3.1M | Full MSA before JPred filters in FASTA |
| jp_fOhibbj.full_MSA.fasta.noGaps.html | 2015-04-17 20:13 | 843K | Full MSA before JPred filters in FASTA |
| jp_fOhibbj.full_MSA.fasta.withGaps.html | 2015-04-17 20:13 | 13M | Full MSA before JPred filters in FASTA |
| jp_fOhibbj.hmm | 2015-04-17 20:13 | 27K | HHMer2 profile of the alignment |
| jp_fOhibbj.html | 2015-04-17 20:13 | 268K | HTML prediction and alignment data |
| jp_fOhibbj.input | 2015-04-17 18:17 | 151 | Raw input data for analysis |
| jp_fOhibbj.jalview | 2015-04-17 20:13 | 3.8K | Jalview annotation file for alignment |
| jp_fOhibbj.jnet | 2015-04-17 20:13 | 5.3K | Jnet secondary structure output |
| jp_fOhibbj.profile | 2015-04-17 20:11 | 23K | PSIBLAST profile from alignment |
| jp_fOhibbj.pssm | 2015-04-17 20:13 | 31K | PSIBLAST PSSM for Jnet |
| jp_fOhibbj.results.html | 2016-02-15 12:21 | 66K | JPred results page |
| jp_fOhibbj.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_fOhibbj.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_fOhibbj.seq | 2015-04-17 18:17 | 159 | Sequence data file |
| jp_fOhibbj.simple.html | 2015-04-17 20:13 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_fOhibbj.svg.html) | jp_fOhibbj.svg.html | 2015-04-17 20:13 | 58K | Jalview SVG summary of results |
| jp_fOhibbj.tar.gz | 2015-04-17 20:13 | 3.3M | Archive containing complete results |
