JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:00 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3qora_.name2015-04-17 19:23 0 Job name flag file
[ ]jp_rNKgqlI.align2015-04-17 21:59 109KPSIBLAST alignment in FASTA format
[TXT]jp_rNKgqlI.als2015-04-17 22:00 2.4KAlscript command file for PS/PDF output
[ ]jp_rNKgqlI.blast.gz2015-04-17 21:58 672KCompressed PSIBLAST output file
[TXT]jp_rNKgqlI.coils.csv2015-04-17 21:59 750 COILS output in CSV format
[ ]jp_rNKgqlI.coilseq.lupas_142015-04-17 21:59 5.0KCOILS output, window length 14
[ ]jp_rNKgqlI.coilseq.lupas_212015-04-17 21:59 5.0KCOILS output, window length 21
[ ]jp_rNKgqlI.coilseq.lupas_282015-04-17 21:59 5.0KCOILS output, window length 28
[ ]jp_rNKgqlI.concise2015-04-17 21:59 214KPrediction: coiled-coil, solvent, alignment
[ ]jp_rNKgqlI.concise.blc2015-04-17 22:00 110KBLC format prediction and alignment data
[ ]jp_rNKgqlI.concise.fasta2015-04-17 22:00 111KPrediction: coiled-coil, solvent, alignment
[ ]jp_rNKgqlI.concise.pdf2015-04-17 22:00 706KPDF prediction and alignment data
[ ]jp_rNKgqlI.concise.ps2015-04-17 22:00 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_rNKgqlI.fasta2015-04-17 21:53 134 Input query sequence in FASTA format
[ ]jp_rNKgqlI.full_MSA.fasta2015-04-17 21:58 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_rNKgqlI.full_MSA.fasta.noGaps.html2015-04-17 22:00 307KFull MSA before JPred filters in FASTA
[TXT]jp_rNKgqlI.full_MSA.fasta.withGaps.html2015-04-17 22:00 4.3MFull MSA before JPred filters in FASTA
[ ]jp_rNKgqlI.hmm2015-04-17 21:59 23KHHMer2 profile of the alignment
[TXT]jp_rNKgqlI.html2015-04-17 21:59 273KHTML prediction and alignment data
[ ]jp_rNKgqlI.input2015-04-17 19:23 127 Raw input data for analysis
[ ]jp_rNKgqlI.jalview2015-04-17 22:00 3.2KJalview annotation file for alignment
[ ]jp_rNKgqlI.jnet2015-04-17 21:59 4.4KJnet secondary structure output
[TXT]jp_rNKgqlI.profile2015-04-17 21:57 19KPSIBLAST profile from alignment
[ ]jp_rNKgqlI.pssm2015-04-17 21:59 26KPSIBLAST PSSM for Jnet
[TXT]jp_rNKgqlI.results.html2016-02-15 12:21 56KJPred results page
[TXT]jp_rNKgqlI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_rNKgqlI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_rNKgqlI.seq2015-04-17 19:23 134 Sequence data file
[TXT]jp_rNKgqlI.simple.html2015-04-17 22:00 1.3KBrief HTML: sequence and prediction only
[TXT]jp_rNKgqlI.svg.html2015-04-17 22:00 48KJalview SVG summary of results
[ ]jp_rNKgqlI.tar.gz2015-04-17 22:00 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.