JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3qzba_.name2015-04-17 17:04 0 Job name flag file
[ ]jp_A1XIY0M.align2015-04-17 18:07 84KPSIBLAST alignment in FASTA format
[TXT]jp_A1XIY0M.als2015-04-17 18:07 2.5KAlscript command file for PS/PDF output
[ ]jp_A1XIY0M.blast.gz2015-04-17 18:07 191KCompressed PSIBLAST output file
[TXT]jp_A1XIY0M.coils.csv2015-04-17 18:07 816 COILS output in CSV format
[ ]jp_A1XIY0M.coilseq.lupas_142015-04-17 18:07 5.5KCOILS output, window length 14
[ ]jp_A1XIY0M.coilseq.lupas_212015-04-17 18:07 5.5KCOILS output, window length 21
[ ]jp_A1XIY0M.coilseq.lupas_282015-04-17 18:07 5.5KCOILS output, window length 28
[ ]jp_A1XIY0M.concise2015-04-17 18:07 166KPrediction: coiled-coil, solvent, alignment
[ ]jp_A1XIY0M.concise.blc2015-04-17 18:07 84KBLC format prediction and alignment data
[ ]jp_A1XIY0M.concise.fasta2015-04-17 18:07 85KPrediction: coiled-coil, solvent, alignment
[ ]jp_A1XIY0M.concise.pdf2015-04-17 18:07 522KPDF prediction and alignment data
[ ]jp_A1XIY0M.concise.ps2015-04-17 18:07 9.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_A1XIY0M.fasta2015-04-17 18:05 145 Input query sequence in FASTA format
[ ]jp_A1XIY0M.full_MSA.fasta2015-04-17 18:07 248KFull MSA before JPred filters in FASTA
[TXT]jp_A1XIY0M.full_MSA.fasta.noGaps.html2015-04-17 18:07 190KFull MSA before JPred filters in FASTA
[TXT]jp_A1XIY0M.full_MSA.fasta.withGaps.html2015-04-17 18:07 1.3MFull MSA before JPred filters in FASTA
[ ]jp_A1XIY0M.hmm2015-04-17 18:07 25KHHMer2 profile of the alignment
[TXT]jp_A1XIY0M.html2015-04-17 18:07 204KHTML prediction and alignment data
[ ]jp_A1XIY0M.input2015-04-17 17:04 138 Raw input data for analysis
[ ]jp_A1XIY0M.jalview2015-04-17 18:07 3.4KJalview annotation file for alignment
[ ]jp_A1XIY0M.jnet2015-04-17 18:07 4.8KJnet secondary structure output
[TXT]jp_A1XIY0M.profile2015-04-17 18:06 21KPSIBLAST profile from alignment
[ ]jp_A1XIY0M.pssm2015-04-17 18:07 28KPSIBLAST PSSM for Jnet
[TXT]jp_A1XIY0M.results.html2016-02-15 12:21 61KJPred results page
[TXT]jp_A1XIY0M.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_A1XIY0M.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_A1XIY0M.seq2015-04-17 17:04 145 Sequence data file
[TXT]jp_A1XIY0M.simple.html2015-04-17 18:07 1.3KBrief HTML: sequence and prediction only
[TXT]jp_A1XIY0M.svg.html2015-04-17 18:07 53KJalview SVG summary of results
[ ]jp_A1XIY0M.tar.gz2015-04-17 18:07 944KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.