JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_X5PjINC.input2015-04-17 19:25 131 Raw input data for analysis
[ ]jp_X5PjINC.seq2015-04-17 19:25 138 Sequence data file
[TXT]d3qzma_.name2015-04-17 19:25 0 Job name flag file
[ ]jp_X5PjINC.fasta2015-04-17 21:57 138 Input query sequence in FASTA format
[TXT]jp_X5PjINC.profile2015-04-17 22:34 20KPSIBLAST profile from alignment
[ ]jp_X5PjINC.blast.gz2015-04-17 22:40 242KCompressed PSIBLAST output file
[ ]jp_X5PjINC.full_MSA.fasta2015-04-17 22:40 535KFull MSA before JPred filters in FASTA
[ ]jp_X5PjINC.align2015-04-17 22:40 71KPSIBLAST alignment in FASTA format
[ ]jp_X5PjINC.pssm2015-04-17 22:40 27KPSIBLAST PSSM for Jnet
[ ]jp_X5PjINC.hmm2015-04-17 22:40 23KHHMer2 profile of the alignment
[ ]jp_X5PjINC.jnet2015-04-17 22:40 4.6KJnet secondary structure output
[ ]jp_X5PjINC.coilseq.lupas_212015-04-17 22:40 5.2KCOILS output, window length 21
[ ]jp_X5PjINC.coilseq.lupas_142015-04-17 22:40 5.2KCOILS output, window length 14
[ ]jp_X5PjINC.coilseq.lupas_282015-04-17 22:40 5.2KCOILS output, window length 28
[TXT]jp_X5PjINC.coils.csv2015-04-17 22:40 774 COILS output in CSV format
[ ]jp_X5PjINC.concise2015-04-17 22:40 141KPrediction: coiled-coil, solvent, alignment
[TXT]jp_X5PjINC.html2015-04-17 22:40 179KHTML prediction and alignment data
[TXT]jp_X5PjINC.simple.html2015-04-17 22:40 1.3KBrief HTML: sequence and prediction only
[ ]jp_X5PjINC.jalview2015-04-17 22:40 3.3KJalview annotation file for alignment
[ ]jp_X5PjINC.concise.fasta2015-04-17 22:40 73KPrediction: coiled-coil, solvent, alignment
[ ]jp_X5PjINC.concise.blc2015-04-17 22:40 72KBLC format prediction and alignment data
[TXT]jp_X5PjINC.als2015-04-17 22:40 2.6KAlscript command file for PS/PDF output
[ ]jp_X5PjINC.concise.ps2015-04-17 22:40 8.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_X5PjINC.concise.pdf2015-04-17 22:41 402KPDF prediction and alignment data
[TXT]jp_X5PjINC.full_MSA.fasta.withGaps.html2015-04-17 22:41 2.8MFull MSA before JPred filters in FASTA
[TXT]jp_X5PjINC.full_MSA.fasta.noGaps.html2015-04-17 22:41 251KFull MSA before JPred filters in FASTA
[TXT]jp_X5PjINC.svg.html2015-04-17 22:41 50KJalview SVG summary of results
[TXT]LOG2015-04-17 22:41 4.7KJPred server log file
[ ]jp_X5PjINC.tar.gz2015-04-17 22:41 911KArchive containing complete results
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_X5PjINC.results.html2016-02-15 12:21 58KJPred results page
[TXT]jp_X5PjINC.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_X5PjINC.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.