JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:16 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3r8ja_.name2015-04-17 19:31 0 Job name flag file
[ ]jp_Ztw6may.align2015-04-17 22:16 147KPSIBLAST alignment in FASTA format
[TXT]jp_Ztw6may.als2015-04-17 22:16 2.9KAlscript command file for PS/PDF output
[ ]jp_Ztw6may.blast.gz2015-04-17 22:15 951KCompressed PSIBLAST output file
[TXT]jp_Ztw6may.coils.csv2015-04-17 22:16 1.1KCOILS output in CSV format
[ ]jp_Ztw6may.coilseq.lupas_142015-04-17 22:16 7.6KCOILS output, window length 14
[ ]jp_Ztw6may.coilseq.lupas_212015-04-17 22:16 7.6KCOILS output, window length 21
[ ]jp_Ztw6may.coilseq.lupas_282015-04-17 22:16 7.6KCOILS output, window length 28
[ ]jp_Ztw6may.concise2015-04-17 22:16 290KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ztw6may.concise.blc2015-04-17 22:16 147KBLC format prediction and alignment data
[ ]jp_Ztw6may.concise.fasta2015-04-17 22:16 149KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ztw6may.concise.pdf2015-04-17 22:16 1.0MPDF prediction and alignment data
[ ]jp_Ztw6may.concise.ps2015-04-17 22:16 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_Ztw6may.fasta2015-04-17 22:12 195 Input query sequence in FASTA format
[ ]jp_Ztw6may.full_MSA.fasta2015-04-17 22:15 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_Ztw6may.full_MSA.fasta.noGaps.html2015-04-17 22:16 328KFull MSA before JPred filters in FASTA
[TXT]jp_Ztw6may.full_MSA.fasta.withGaps.html2015-04-17 22:16 5.5MFull MSA before JPred filters in FASTA
[ ]jp_Ztw6may.hmm2015-04-17 22:16 34KHHMer2 profile of the alignment
[TXT]jp_Ztw6may.html2015-04-17 22:16 306KHTML prediction and alignment data
[ ]jp_Ztw6may.input2015-04-17 19:31 187 Raw input data for analysis
[ ]jp_Ztw6may.jalview2015-04-17 22:16 4.4KJalview annotation file for alignment
[ ]jp_Ztw6may.jnet2015-04-17 22:16 6.6KJnet secondary structure output
[TXT]jp_Ztw6may.profile2015-04-17 22:14 29KPSIBLAST profile from alignment
[ ]jp_Ztw6may.pssm2015-04-17 22:16 39KPSIBLAST PSSM for Jnet
[TXT]jp_Ztw6may.results.html2016-02-15 12:21 79KJPred results page
[TXT]jp_Ztw6may.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Ztw6may.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Ztw6may.seq2015-04-17 19:31 195 Sequence data file
[TXT]jp_Ztw6may.simple.html2015-04-17 22:16 1.5KBrief HTML: sequence and prediction only
[TXT]jp_Ztw6may.svg.html2015-04-17 22:16 71KJalview SVG summary of results
[ ]jp_Ztw6may.tar.gz2015-04-17 22:16 2.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.