JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:42 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rlff2.name2015-04-17 16:27 0 Job name flag file
[ ]jp_98rfXSH.align2015-04-17 17:41 206KPSIBLAST alignment in FASTA format
[TXT]jp_98rfXSH.als2015-04-17 17:41 2.8KAlscript command file for PS/PDF output
[ ]jp_98rfXSH.blast.gz2015-04-17 17:34 8.5MCompressed PSIBLAST output file
[TXT]jp_98rfXSH.coils.csv2015-04-17 17:41 1.5KCOILS output in CSV format
[ ]jp_98rfXSH.coilseq.lupas_142015-04-17 17:41 10KCOILS output, window length 14
[ ]jp_98rfXSH.coilseq.lupas_212015-04-17 17:41 10KCOILS output, window length 21
[ ]jp_98rfXSH.coilseq.lupas_282015-04-17 17:41 10KCOILS output, window length 28
[ ]jp_98rfXSH.concise2015-04-17 17:41 408KPrediction: coiled-coil, solvent, alignment
[ ]jp_98rfXSH.concise.blc2015-04-17 17:41 207KBLC format prediction and alignment data
[ ]jp_98rfXSH.concise.fasta2015-04-17 17:41 208KPrediction: coiled-coil, solvent, alignment
[ ]jp_98rfXSH.concise.pdf2015-04-17 17:41 1.3MPDF prediction and alignment data
[ ]jp_98rfXSH.concise.ps2015-04-17 17:41 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_98rfXSH.fasta2015-04-17 17:00 259 Input query sequence in FASTA format
[ ]jp_98rfXSH.full_MSA.fasta2015-04-17 17:40 13MFull MSA before JPred filters in FASTA
[TXT]jp_98rfXSH.full_MSA.fasta.noGaps.html2015-04-17 17:42 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_98rfXSH.full_MSA.fasta.withGaps.html2015-04-17 17:42 54MFull MSA before JPred filters in FASTA
[ ]jp_98rfXSH.hmm2015-04-17 17:41 46KHHMer2 profile of the alignment
[TXT]jp_98rfXSH.html2015-04-17 17:41 385KHTML prediction and alignment data
[ ]jp_98rfXSH.input2015-04-17 16:27 250 Raw input data for analysis
[ ]jp_98rfXSH.jalview2015-04-17 17:41 5.8KJalview annotation file for alignment
[ ]jp_98rfXSH.jnet2015-04-17 17:41 8.9KJnet secondary structure output
[TXT]jp_98rfXSH.profile2015-04-17 17:31 39KPSIBLAST profile from alignment
[ ]jp_98rfXSH.pssm2015-04-17 17:41 52KPSIBLAST PSSM for Jnet
[TXT]jp_98rfXSH.results.html2016-02-15 12:21 105KJPred results page
[TXT]jp_98rfXSH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_98rfXSH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_98rfXSH.seq2015-04-17 16:27 259 Sequence data file
[TXT]jp_98rfXSH.simple.html2015-04-17 17:41 1.6KBrief HTML: sequence and prediction only
[TXT]jp_98rfXSH.svg.html2015-04-17 17:42 97KJalview SVG summary of results
[ ]jp_98rfXSH.tar.gz2015-04-17 17:42 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.