JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:00 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rssa1.name2015-04-17 18:54 0 Job name flag file
[ ]jp_HnKojQO.align2015-04-17 21:58 388KPSIBLAST alignment in FASTA format
[TXT]jp_HnKojQO.als2015-04-17 21:58 5.9KAlscript command file for PS/PDF output
[ ]jp_HnKojQO.blast.gz2015-04-17 21:52 21MCompressed PSIBLAST output file
[TXT]jp_HnKojQO.coils.csv2015-04-17 21:58 2.9KCOILS output in CSV format
[ ]jp_HnKojQO.coilseq.lupas_142015-04-17 21:58 21KCOILS output, window length 14
[ ]jp_HnKojQO.coilseq.lupas_212015-04-17 21:58 21KCOILS output, window length 21
[ ]jp_HnKojQO.coilseq.lupas_282015-04-17 21:58 21KCOILS output, window length 28
[ ]jp_HnKojQO.concise2015-04-17 21:58 779KPrediction: coiled-coil, solvent, alignment
[ ]jp_HnKojQO.concise.blc2015-04-17 21:58 390KBLC format prediction and alignment data
[ ]jp_HnKojQO.concise.fasta2015-04-17 21:58 393KPrediction: coiled-coil, solvent, alignment
[ ]jp_HnKojQO.concise.pdf2015-04-17 21:59 2.7MPDF prediction and alignment data
[ ]jp_HnKojQO.concise.ps2015-04-17 21:58 49MPrediction: coiled-coil, solvent, alignment
[ ]jp_HnKojQO.fasta2015-04-17 21:01 513 Input query sequence in FASTA format
[ ]jp_HnKojQO.full_MSA.fasta2015-04-17 21:56 42MFull MSA before JPred filters in FASTA
[TXT]jp_HnKojQO.full_MSA.fasta.noGaps.html2015-04-17 22:00 3.3MFull MSA before JPred filters in FASTA
[TXT]jp_HnKojQO.full_MSA.fasta.withGaps.html2015-04-17 22:00 100MFull MSA before JPred filters in FASTA
[ ]jp_HnKojQO.hmm2015-04-17 21:58 93KHHMer2 profile of the alignment
[TXT]jp_HnKojQO.html2015-04-17 21:58 579KHTML prediction and alignment data
[ ]jp_HnKojQO.input2015-04-17 18:54 501 Raw input data for analysis
[ ]jp_HnKojQO.jalview2015-04-17 21:58 11KJalview annotation file for alignment
[ ]jp_HnKojQO.jnet2015-04-17 21:58 18KJnet secondary structure output
[TXT]jp_HnKojQO.profile2015-04-17 21:37 79KPSIBLAST profile from alignment
[ ]jp_HnKojQO.pssm2015-04-17 21:58 106KPSIBLAST PSSM for Jnet
[TXT]jp_HnKojQO.results.html2016-02-15 12:21 204KJPred results page
[TXT]jp_HnKojQO.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_HnKojQO.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_HnKojQO.seq2015-04-17 18:54 513 Sequence data file
[TXT]jp_HnKojQO.simple.html2015-04-17 21:58 2.7KBrief HTML: sequence and prediction only
[TXT]jp_HnKojQO.svg.html2015-04-17 22:00 196KJalview SVG summary of results
[ ]jp_HnKojQO.tar.gz2015-04-17 22:00 35MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.