JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3sxua_.name2015-04-17 18:55 0 Job name flag file
[ ]jp_8h8C3T6.align2015-04-17 21:06 129KPSIBLAST alignment in FASTA format
[TXT]jp_8h8C3T6.als2015-04-17 21:06 2.6KAlscript command file for PS/PDF output
[ ]jp_8h8C3T6.blast.gz2015-04-17 21:06 477KCompressed PSIBLAST output file
[TXT]jp_8h8C3T6.coils.csv2015-04-17 21:06 906 COILS output in CSV format
[ ]jp_8h8C3T6.coilseq.lupas_142015-04-17 21:06 6.1KCOILS output, window length 14
[ ]jp_8h8C3T6.coilseq.lupas_212015-04-17 21:06 6.1KCOILS output, window length 21
[ ]jp_8h8C3T6.coilseq.lupas_282015-04-17 21:06 6.1KCOILS output, window length 28
[ ]jp_8h8C3T6.concise2015-04-17 21:06 252KPrediction: coiled-coil, solvent, alignment
[ ]jp_8h8C3T6.concise.blc2015-04-17 21:06 129KBLC format prediction and alignment data
[ ]jp_8h8C3T6.concise.fasta2015-04-17 21:06 131KPrediction: coiled-coil, solvent, alignment
[ ]jp_8h8C3T6.concise.pdf2015-04-17 21:07 863KPDF prediction and alignment data
[ ]jp_8h8C3T6.concise.ps2015-04-17 21:06 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_8h8C3T6.fasta2015-04-17 21:01 161 Input query sequence in FASTA format
[ ]jp_8h8C3T6.full_MSA.fasta2015-04-17 21:06 727KFull MSA before JPred filters in FASTA
[TXT]jp_8h8C3T6.full_MSA.fasta.noGaps.html2015-04-17 21:07 305KFull MSA before JPred filters in FASTA
[TXT]jp_8h8C3T6.full_MSA.fasta.withGaps.html2015-04-17 21:07 3.3MFull MSA before JPred filters in FASTA
[ ]jp_8h8C3T6.hmm2015-04-17 21:06 27KHHMer2 profile of the alignment
[TXT]jp_8h8C3T6.html2015-04-17 21:06 294KHTML prediction and alignment data
[ ]jp_8h8C3T6.input2015-04-17 18:55 153 Raw input data for analysis
[ ]jp_8h8C3T6.jalview2015-04-17 21:06 3.7KJalview annotation file for alignment
[ ]jp_8h8C3T6.jnet2015-04-17 21:06 5.4KJnet secondary structure output
[TXT]jp_8h8C3T6.profile2015-04-17 21:04 24KPSIBLAST profile from alignment
[ ]jp_8h8C3T6.pssm2015-04-17 21:06 31KPSIBLAST PSSM for Jnet
[TXT]jp_8h8C3T6.results.html2016-02-15 12:21 67KJPred results page
[TXT]jp_8h8C3T6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_8h8C3T6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_8h8C3T6.seq2015-04-17 18:55 161 Sequence data file
[TXT]jp_8h8C3T6.simple.html2015-04-17 21:06 1.4KBrief HTML: sequence and prediction only
[TXT]jp_8h8C3T6.svg.html2015-04-17 21:07 59KJalview SVG summary of results
[ ]jp_8h8C3T6.tar.gz2015-04-17 21:07 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.