JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3t3la_.name2015-04-17 17:05 0 Job name flag file
[ ]jp_FNPhKLW.align2015-04-17 18:12 80KPSIBLAST alignment in FASTA format
[TXT]jp_FNPhKLW.als2015-04-17 18:12 2.6KAlscript command file for PS/PDF output
[ ]jp_FNPhKLW.blast.gz2015-04-17 18:12 365KCompressed PSIBLAST output file
[TXT]jp_FNPhKLW.coils.csv2015-04-17 18:12 756 COILS output in CSV format
[ ]jp_FNPhKLW.coilseq.lupas_142015-04-17 18:12 5.1KCOILS output, window length 14
[ ]jp_FNPhKLW.coilseq.lupas_212015-04-17 18:12 5.1KCOILS output, window length 21
[ ]jp_FNPhKLW.coilseq.lupas_282015-04-17 18:12 5.1KCOILS output, window length 28
[ ]jp_FNPhKLW.concise2015-04-17 18:12 158KPrediction: coiled-coil, solvent, alignment
[ ]jp_FNPhKLW.concise.blc2015-04-17 18:12 81KBLC format prediction and alignment data
[ ]jp_FNPhKLW.concise.fasta2015-04-17 18:12 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_FNPhKLW.concise.pdf2015-04-17 18:12 506KPDF prediction and alignment data
[ ]jp_FNPhKLW.concise.ps2015-04-17 18:12 9.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_FNPhKLW.fasta2015-04-17 18:05 135 Input query sequence in FASTA format
[ ]jp_FNPhKLW.full_MSA.fasta2015-04-17 18:12 541KFull MSA before JPred filters in FASTA
[TXT]jp_FNPhKLW.full_MSA.fasta.noGaps.html2015-04-17 18:12 249KFull MSA before JPred filters in FASTA
[TXT]jp_FNPhKLW.full_MSA.fasta.withGaps.html2015-04-17 18:12 2.1MFull MSA before JPred filters in FASTA
[ ]jp_FNPhKLW.hmm2015-04-17 18:12 23KHHMer2 profile of the alignment
[TXT]jp_FNPhKLW.html2015-04-17 18:12 205KHTML prediction and alignment data
[ ]jp_FNPhKLW.input2015-04-17 17:05 128 Raw input data for analysis
[ ]jp_FNPhKLW.jalview2015-04-17 18:12 3.3KJalview annotation file for alignment
[ ]jp_FNPhKLW.jnet2015-04-17 18:12 4.5KJnet secondary structure output
[TXT]jp_FNPhKLW.profile2015-04-17 18:10 20KPSIBLAST profile from alignment
[ ]jp_FNPhKLW.pssm2015-04-17 18:12 26KPSIBLAST PSSM for Jnet
[TXT]jp_FNPhKLW.results.html2016-02-15 12:21 58KJPred results page
[TXT]jp_FNPhKLW.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_FNPhKLW.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_FNPhKLW.seq2015-04-17 17:05 135 Sequence data file
[TXT]jp_FNPhKLW.simple.html2015-04-17 18:12 1.3KBrief HTML: sequence and prediction only
[TXT]jp_FNPhKLW.svg.html2015-04-17 18:13 50KJalview SVG summary of results
[ ]jp_FNPhKLW.tar.gz2015-04-17 18:13 1.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.