JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_qSf8e8U.als2015-04-17 16:13 3.4KAlscript command file for PS/PDF output
[ ]jp_qSf8e8U.tar.gz2015-04-17 16:15 19MArchive containing complete results
[ ]jp_qSf8e8U.concise.blc2015-04-17 16:13 204KBLC format prediction and alignment data
[TXT]jp_qSf8e8U.simple.html2015-04-17 16:13 1.6KBrief HTML: sequence and prediction only
[TXT]jp_qSf8e8U.coils.csv2015-04-17 16:13 1.2KCOILS output in CSV format
[ ]jp_qSf8e8U.coilseq.lupas_142015-04-17 16:13 8.7KCOILS output, window length 14
[ ]jp_qSf8e8U.coilseq.lupas_212015-04-17 16:13 8.7KCOILS output, window length 21
[ ]jp_qSf8e8U.coilseq.lupas_282015-04-17 16:13 8.7KCOILS output, window length 28
[ ]jp_qSf8e8U.blast.gz2015-04-17 16:11 11MCompressed PSIBLAST output file
[ ]jp_qSf8e8U.full_MSA.fasta2015-04-17 16:13 25MFull MSA before JPred filters in FASTA
[TXT]jp_qSf8e8U.full_MSA.fasta.noGaps.html2015-04-17 16:14 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_qSf8e8U.full_MSA.fasta.withGaps.html2015-04-17 16:14 60MFull MSA before JPred filters in FASTA
[ ]jp_qSf8e8U.hmm2015-04-17 16:13 39KHHMer2 profile of the alignment
[TXT]jp_qSf8e8U.html2015-04-17 16:13 397KHTML prediction and alignment data
[TXT]jp_qSf8e8U.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qSf8e8U.fasta2015-04-17 16:07 221 Input query sequence in FASTA format
[TXT]jp_qSf8e8U.results.html2016-02-15 12:21 89KJPred results page
[TXT]LOG2015-04-17 16:14 4.7KJPred server log file
[TXT]jp_qSf8e8U.svg.html2015-04-17 16:14 81KJalview SVG summary of results
[ ]jp_qSf8e8U.jalview2015-04-17 16:13 4.9KJalview annotation file for alignment
[TXT]jp_qSf8e8U.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_qSf8e8U.jnet2015-04-17 16:13 7.6KJnet secondary structure output
[TXT]d3u9wa1.name2015-04-17 15:51 0 Job name flag file
[ ]jp_qSf8e8U.concise.pdf2015-04-17 16:14 1.4MPDF prediction and alignment data
[ ]jp_qSf8e8U.pssm2015-04-17 16:13 44KPSIBLAST PSSM for Jnet
[ ]jp_qSf8e8U.align2015-04-17 16:13 204KPSIBLAST alignment in FASTA format
[TXT]jp_qSf8e8U.profile2015-04-17 16:10 33KPSIBLAST profile from alignment
[ ]jp_qSf8e8U.concise2015-04-17 16:13 402KPrediction: coiled-coil, solvent, alignment
[ ]jp_qSf8e8U.concise.fasta2015-04-17 16:13 206KPrediction: coiled-coil, solvent, alignment
[ ]jp_qSf8e8U.concise.ps2015-04-17 16:13 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_qSf8e8U.input2015-04-17 15:51 213 Raw input data for analysis
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[ ]jp_qSf8e8U.seq2015-04-17 15:51 221 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.