JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3uawa_.name2015-04-17 18:55 0 Job name flag file
[ ]jp_KhCwd7S.align2015-04-17 21:12 215KPSIBLAST alignment in FASTA format
[TXT]jp_KhCwd7S.als2015-04-17 21:12 3.6KAlscript command file for PS/PDF output
[ ]jp_KhCwd7S.blast.gz2015-04-17 21:11 7.1MCompressed PSIBLAST output file
[TXT]jp_KhCwd7S.coils.csv2015-04-17 21:12 1.4KCOILS output in CSV format
[ ]jp_KhCwd7S.coilseq.lupas_142015-04-17 21:12 9.8KCOILS output, window length 14
[ ]jp_KhCwd7S.coilseq.lupas_212015-04-17 21:12 9.8KCOILS output, window length 21
[ ]jp_KhCwd7S.coilseq.lupas_282015-04-17 21:12 9.8KCOILS output, window length 28
[ ]jp_KhCwd7S.concise2015-04-17 21:12 425KPrediction: coiled-coil, solvent, alignment
[ ]jp_KhCwd7S.concise.blc2015-04-17 21:12 215KBLC format prediction and alignment data
[ ]jp_KhCwd7S.concise.fasta2015-04-17 21:12 217KPrediction: coiled-coil, solvent, alignment
[ ]jp_KhCwd7S.concise.pdf2015-04-17 21:13 1.5MPDF prediction and alignment data
[ ]jp_KhCwd7S.concise.ps2015-04-17 21:12 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_KhCwd7S.fasta2015-04-17 21:01 249 Input query sequence in FASTA format
[ ]jp_KhCwd7S.full_MSA.fasta2015-04-17 21:12 17MFull MSA before JPred filters in FASTA
[TXT]jp_KhCwd7S.full_MSA.fasta.noGaps.html2015-04-17 21:13 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_KhCwd7S.full_MSA.fasta.withGaps.html2015-04-17 21:13 44MFull MSA before JPred filters in FASTA
[ ]jp_KhCwd7S.hmm2015-04-17 21:12 44KHHMer2 profile of the alignment
[TXT]jp_KhCwd7S.html2015-04-17 21:12 404KHTML prediction and alignment data
[ ]jp_KhCwd7S.input2015-04-17 18:55 240 Raw input data for analysis
[ ]jp_KhCwd7S.jalview2015-04-17 21:12 5.5KJalview annotation file for alignment
[ ]jp_KhCwd7S.jnet2015-04-17 21:12 8.5KJnet secondary structure output
[TXT]jp_KhCwd7S.profile2015-04-17 21:07 37KPSIBLAST profile from alignment
[ ]jp_KhCwd7S.pssm2015-04-17 21:12 50KPSIBLAST PSSM for Jnet
[TXT]jp_KhCwd7S.results.html2016-02-15 12:21 102KJPred results page
[TXT]jp_KhCwd7S.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KhCwd7S.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KhCwd7S.seq2015-04-17 18:55 249 Sequence data file
[TXT]jp_KhCwd7S.simple.html2015-04-17 21:12 1.7KBrief HTML: sequence and prediction only
[TXT]jp_KhCwd7S.svg.html2015-04-17 21:13 94KJalview SVG summary of results
[ ]jp_KhCwd7S.tar.gz2015-04-17 21:13 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.