JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ucia_.name2015-04-17 18:55 0 Job name flag file
[ ]jp_mkSVzif.align2015-04-17 21:06 55KPSIBLAST alignment in FASTA format
[TXT]jp_mkSVzif.als2015-04-17 21:06 1.2KAlscript command file for PS/PDF output
[ ]jp_mkSVzif.blast.gz2015-04-17 21:06 1.1MCompressed PSIBLAST output file
[TXT]jp_mkSVzif.coils.csv2015-04-17 21:06 462 COILS output in CSV format
[ ]jp_mkSVzif.coilseq.lupas_142015-04-17 21:06 3.0KCOILS output, window length 14
[ ]jp_mkSVzif.coilseq.lupas_212015-04-17 21:06 3.0KCOILS output, window length 21
[ ]jp_mkSVzif.coilseq.lupas_282015-04-17 21:06 3.0KCOILS output, window length 28
[ ]jp_mkSVzif.concise2015-04-17 21:06 105KPrediction: coiled-coil, solvent, alignment
[ ]jp_mkSVzif.concise.blc2015-04-17 21:06 55KBLC format prediction and alignment data
[ ]jp_mkSVzif.concise.fasta2015-04-17 21:06 56KPrediction: coiled-coil, solvent, alignment
[ ]jp_mkSVzif.concise.pdf2015-04-17 21:07 275KPDF prediction and alignment data
[ ]jp_mkSVzif.concise.ps2015-04-17 21:06 5.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_mkSVzif.fasta2015-04-17 21:01 86 Input query sequence in FASTA format
[ ]jp_mkSVzif.full_MSA.fasta2015-04-17 21:06 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_mkSVzif.full_MSA.fasta.noGaps.html2015-04-17 21:07 670KFull MSA before JPred filters in FASTA
[TXT]jp_mkSVzif.full_MSA.fasta.withGaps.html2015-04-17 21:07 6.9MFull MSA before JPred filters in FASTA
[ ]jp_mkSVzif.hmm2015-04-17 21:06 14KHHMer2 profile of the alignment
[TXT]jp_mkSVzif.html2015-04-17 21:06 176KHTML prediction and alignment data
[ ]jp_mkSVzif.input2015-04-17 18:55 79 Raw input data for analysis
[ ]jp_mkSVzif.jalview2015-04-17 21:06 2.1KJalview annotation file for alignment
[ ]jp_mkSVzif.jnet2015-04-17 21:06 2.7KJnet secondary structure output
[TXT]jp_mkSVzif.profile2015-04-17 21:04 12KPSIBLAST profile from alignment
[ ]jp_mkSVzif.pssm2015-04-17 21:06 15KPSIBLAST PSSM for Jnet
[TXT]jp_mkSVzif.results.html2016-02-15 12:21 36KJPred results page
[TXT]jp_mkSVzif.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mkSVzif.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mkSVzif.seq2015-04-17 18:55 86 Sequence data file
[TXT]jp_mkSVzif.simple.html2015-04-17 21:06 1.0KBrief HTML: sequence and prediction only
[TXT]jp_mkSVzif.svg.html2015-04-17 21:07 28KJalview SVG summary of results
[ ]jp_mkSVzif.tar.gz2015-04-17 21:07 2.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.