JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ulja_.name2015-04-17 17:05 0 Job name flag file
[ ]jp_5lyUa83.align2015-04-17 18:13 74KPSIBLAST alignment in FASTA format
[TXT]jp_5lyUa83.als2015-04-17 18:13 2.0KAlscript command file for PS/PDF output
[ ]jp_5lyUa83.blast.gz2015-04-17 18:12 2.2MCompressed PSIBLAST output file
[TXT]jp_5lyUa83.coils.csv2015-04-17 18:13 552 COILS output in CSV format
[ ]jp_5lyUa83.coilseq.lupas_142015-04-17 18:13 3.7KCOILS output, window length 14
[ ]jp_5lyUa83.coilseq.lupas_212015-04-17 18:13 3.7KCOILS output, window length 21
[ ]jp_5lyUa83.coilseq.lupas_282015-04-17 18:13 3.7KCOILS output, window length 28
[ ]jp_5lyUa83.concise2015-04-17 18:13 143KPrediction: coiled-coil, solvent, alignment
[ ]jp_5lyUa83.concise.blc2015-04-17 18:13 74KBLC format prediction and alignment data
[ ]jp_5lyUa83.concise.fasta2015-04-17 18:13 75KPrediction: coiled-coil, solvent, alignment
[ ]jp_5lyUa83.concise.pdf2015-04-17 18:13 392KPDF prediction and alignment data
[ ]jp_5lyUa83.concise.ps2015-04-17 18:13 7.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_5lyUa83.fasta2015-04-17 18:07 101 Input query sequence in FASTA format
[ ]jp_5lyUa83.full_MSA.fasta2015-04-17 18:12 4.2MFull MSA before JPred filters in FASTA
[TXT]jp_5lyUa83.full_MSA.fasta.noGaps.html2015-04-17 18:13 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_5lyUa83.full_MSA.fasta.withGaps.html2015-04-17 18:13 17MFull MSA before JPred filters in FASTA
[ ]jp_5lyUa83.hmm2015-04-17 18:13 16KHHMer2 profile of the alignment
[TXT]jp_5lyUa83.html2015-04-17 18:13 218KHTML prediction and alignment data
[ ]jp_5lyUa83.input2015-04-17 17:05 94 Raw input data for analysis
[ ]jp_5lyUa83.jalview2015-04-17 18:13 2.5KJalview annotation file for alignment
[ ]jp_5lyUa83.jnet2015-04-17 18:13 3.3KJnet secondary structure output
[TXT]jp_5lyUa83.profile2015-04-17 18:11 14KPSIBLAST profile from alignment
[ ]jp_5lyUa83.pssm2015-04-17 18:13 19KPSIBLAST PSSM for Jnet
[TXT]jp_5lyUa83.results.html2016-02-15 12:21 43KJPred results page
[TXT]jp_5lyUa83.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5lyUa83.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5lyUa83.seq2015-04-17 17:05 101 Sequence data file
[TXT]jp_5lyUa83.simple.html2015-04-17 18:13 1.1KBrief HTML: sequence and prediction only
[TXT]jp_5lyUa83.svg.html2015-04-17 18:13 35KJalview SVG summary of results
[ ]jp_5lyUa83.tar.gz2015-04-17 18:13 4.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.