JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3v5wg_.name2015-04-17 15:51 0 Job name flag file
[ ]jp_ZjnPqds.align2015-04-17 16:11 15KPSIBLAST alignment in FASTA format
[TXT]jp_ZjnPqds.als2015-04-17 16:11 1.5KAlscript command file for PS/PDF output
[ ]jp_ZjnPqds.blast.gz2015-04-17 16:11 88KCompressed PSIBLAST output file
[TXT]jp_ZjnPqds.coils.csv2015-04-17 16:11 372 COILS output in CSV format
[ ]jp_ZjnPqds.coilseq.lupas_142015-04-17 16:11 2.4KCOILS output, window length 14
[ ]jp_ZjnPqds.coilseq.lupas_212015-04-17 16:11 2.4KCOILS output, window length 21
[ ]jp_ZjnPqds.coilseq.lupas_282015-04-17 16:11 2.4KCOILS output, window length 28
[ ]jp_ZjnPqds.concise2015-04-17 16:11 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZjnPqds.concise.blc2015-04-17 16:11 16KBLC format prediction and alignment data
[ ]jp_ZjnPqds.concise.fasta2015-04-17 16:11 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZjnPqds.concise.pdf2015-04-17 16:11 92KPDF prediction and alignment data
[ ]jp_ZjnPqds.concise.ps2015-04-17 16:11 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_ZjnPqds.fasta2015-04-17 16:07 70 Input query sequence in FASTA format
[ ]jp_ZjnPqds.full_MSA.fasta2015-04-17 16:11 137KFull MSA before JPred filters in FASTA
[TXT]jp_ZjnPqds.full_MSA.fasta.noGaps.html2015-04-17 16:11 99KFull MSA before JPred filters in FASTA
[TXT]jp_ZjnPqds.full_MSA.fasta.withGaps.html2015-04-17 16:11 463KFull MSA before JPred filters in FASTA
[ ]jp_ZjnPqds.hmm2015-04-17 16:11 11KHHMer2 profile of the alignment
[TXT]jp_ZjnPqds.html2015-04-17 16:11 61KHTML prediction and alignment data
[ ]jp_ZjnPqds.input2015-04-17 15:51 64 Raw input data for analysis
[ ]jp_ZjnPqds.jalview2015-04-17 16:11 2.0KJalview annotation file for alignment
[ ]jp_ZjnPqds.jnet2015-04-17 16:11 2.2KJnet secondary structure output
[TXT]jp_ZjnPqds.profile2015-04-17 16:09 9.5KPSIBLAST profile from alignment
[ ]jp_ZjnPqds.pssm2015-04-17 16:11 12KPSIBLAST PSSM for Jnet
[TXT]jp_ZjnPqds.results.html2016-02-15 12:21 33KJPred results page
[TXT]jp_ZjnPqds.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ZjnPqds.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ZjnPqds.seq2015-04-17 15:51 70 Sequence data file
[TXT]jp_ZjnPqds.simple.html2015-04-17 16:11 1.0KBrief HTML: sequence and prediction only
[TXT]jp_ZjnPqds.svg.html2015-04-17 16:12 25KJalview SVG summary of results
[ ]jp_ZjnPqds.tar.gz2015-04-17 16:12 270KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.