JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:16 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3wcqa_.name2015-04-17 17:06 0 Job name flag file
[ ]jp_jquKZE_.align2015-04-17 18:15 98KPSIBLAST alignment in FASTA format
[TXT]jp_jquKZE_.als2015-04-17 18:15 2.1KAlscript command file for PS/PDF output
[ ]jp_jquKZE_.blast.gz2015-04-17 18:14 4.9MCompressed PSIBLAST output file
[TXT]jp_jquKZE_.coils.csv2015-04-17 18:15 612 COILS output in CSV format
[ ]jp_jquKZE_.coilseq.lupas_142015-04-17 18:15 4.1KCOILS output, window length 14
[ ]jp_jquKZE_.coilseq.lupas_212015-04-17 18:15 4.1KCOILS output, window length 21
[ ]jp_jquKZE_.coilseq.lupas_282015-04-17 18:15 4.1KCOILS output, window length 28
[ ]jp_jquKZE_.concise2015-04-17 18:15 189KPrediction: coiled-coil, solvent, alignment
[ ]jp_jquKZE_.concise.blc2015-04-17 18:15 98KBLC format prediction and alignment data
[ ]jp_jquKZE_.concise.fasta2015-04-17 18:15 99KPrediction: coiled-coil, solvent, alignment
[ ]jp_jquKZE_.concise.pdf2015-04-17 18:15 617KPDF prediction and alignment data
[ ]jp_jquKZE_.concise.ps2015-04-17 18:15 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_jquKZE_.fasta2015-04-17 18:07 111 Input query sequence in FASTA format
[ ]jp_jquKZE_.full_MSA.fasta2015-04-17 18:15 9.7MFull MSA before JPred filters in FASTA
[TXT]jp_jquKZE_.full_MSA.fasta.noGaps.html2015-04-17 18:16 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_jquKZE_.full_MSA.fasta.withGaps.html2015-04-17 18:16 32MFull MSA before JPred filters in FASTA
[ ]jp_jquKZE_.hmm2015-04-17 18:15 18KHHMer2 profile of the alignment
[TXT]jp_jquKZE_.html2015-04-17 18:15 272KHTML prediction and alignment data
[ ]jp_jquKZE_.input2015-04-17 17:06 104 Raw input data for analysis
[ ]jp_jquKZE_.jalview2015-04-17 18:15 2.7KJalview annotation file for alignment
[ ]jp_jquKZE_.jnet2015-04-17 18:15 3.6KJnet secondary structure output
[TXT]jp_jquKZE_.profile2015-04-17 18:11 16KPSIBLAST profile from alignment
[ ]jp_jquKZE_.pssm2015-04-17 18:15 21KPSIBLAST PSSM for Jnet
[TXT]jp_jquKZE_.results.html2016-02-15 12:21 48KJPred results page
[TXT]jp_jquKZE_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_jquKZE_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_jquKZE_.seq2015-04-17 17:06 111 Sequence data file
[TXT]jp_jquKZE_.simple.html2015-04-17 18:15 1.2KBrief HTML: sequence and prediction only
[TXT]jp_jquKZE_.svg.html2015-04-17 18:16 40KJalview SVG summary of results
[ ]jp_jquKZE_.tar.gz2015-04-17 18:16 8.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.