JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:04 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3zyla2.name2015-04-17 16:29 0 Job name flag file
[ ]jp_Qip6pI7.align2015-04-17 17:04 47KPSIBLAST alignment in FASTA format
[TXT]jp_Qip6pI7.als2015-04-17 17:04 1.7KAlscript command file for PS/PDF output
[ ]jp_Qip6pI7.blast.gz2015-04-17 17:04 323KCompressed PSIBLAST output file
[TXT]jp_Qip6pI7.coils.csv2015-04-17 17:04 726 COILS output in CSV format
[ ]jp_Qip6pI7.coilseq.lupas_142015-04-17 17:04 4.9KCOILS output, window length 14
[ ]jp_Qip6pI7.coilseq.lupas_212015-04-17 17:04 4.9KCOILS output, window length 21
[ ]jp_Qip6pI7.coilseq.lupas_282015-04-17 17:04 4.9KCOILS output, window length 28
[ ]jp_Qip6pI7.concise2015-04-17 17:04 95KPrediction: coiled-coil, solvent, alignment
[ ]jp_Qip6pI7.concise.blc2015-04-17 17:04 49KBLC format prediction and alignment data
[ ]jp_Qip6pI7.concise.fasta2015-04-17 17:04 49KPrediction: coiled-coil, solvent, alignment
[ ]jp_Qip6pI7.concise.pdf2015-04-17 17:04 314KPDF prediction and alignment data
[ ]jp_Qip6pI7.concise.ps2015-04-17 17:04 5.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_Qip6pI7.fasta2015-04-17 17:02 130 Input query sequence in FASTA format
[ ]jp_Qip6pI7.full_MSA.fasta2015-04-17 17:04 580KFull MSA before JPred filters in FASTA
[TXT]jp_Qip6pI7.full_MSA.fasta.noGaps.html2015-04-17 17:04 270KFull MSA before JPred filters in FASTA
[TXT]jp_Qip6pI7.full_MSA.fasta.withGaps.html2015-04-17 17:04 2.4MFull MSA before JPred filters in FASTA
[ ]jp_Qip6pI7.hmm2015-04-17 17:04 22KHHMer2 profile of the alignment
[TXT]jp_Qip6pI7.html2015-04-17 17:04 131KHTML prediction and alignment data
[ ]jp_Qip6pI7.input2015-04-17 16:29 123 Raw input data for analysis
[ ]jp_Qip6pI7.jalview2015-04-17 17:04 3.2KJalview annotation file for alignment
[ ]jp_Qip6pI7.jnet2015-04-17 17:04 4.3KJnet secondary structure output
[TXT]jp_Qip6pI7.profile2015-04-17 17:03 19KPSIBLAST profile from alignment
[ ]jp_Qip6pI7.pssm2015-04-17 17:04 25KPSIBLAST PSSM for Jnet
[TXT]jp_Qip6pI7.results.html2016-02-15 12:21 54KJPred results page
[TXT]jp_Qip6pI7.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Qip6pI7.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Qip6pI7.seq2015-04-17 16:29 130 Sequence data file
[TXT]jp_Qip6pI7.simple.html2015-04-17 17:04 1.2KBrief HTML: sequence and prediction only
[TXT]jp_Qip6pI7.svg.html2015-04-17 17:04 46KJalview SVG summary of results
[ ]jp_Qip6pI7.tar.gz2015-04-17 17:04 917KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.