JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:38 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3zyqa1.name2015-04-17 15:51 0 Job name flag file
[ ]jp_qRGIaqZ.align2015-04-17 16:38 81KPSIBLAST alignment in FASTA format
[TXT]jp_qRGIaqZ.als2015-04-17 16:38 2.4KAlscript command file for PS/PDF output
[ ]jp_qRGIaqZ.blast.gz2015-04-17 16:37 1.4MCompressed PSIBLAST output file
[TXT]jp_qRGIaqZ.coils.csv2015-04-17 16:38 882 COILS output in CSV format
[ ]jp_qRGIaqZ.coilseq.lupas_142015-04-17 16:38 6.0KCOILS output, window length 14
[ ]jp_qRGIaqZ.coilseq.lupas_212015-04-17 16:38 6.0KCOILS output, window length 21
[ ]jp_qRGIaqZ.coilseq.lupas_282015-04-17 16:38 6.0KCOILS output, window length 28
[ ]jp_qRGIaqZ.concise2015-04-17 16:38 161KPrediction: coiled-coil, solvent, alignment
[ ]jp_qRGIaqZ.concise.blc2015-04-17 16:38 82KBLC format prediction and alignment data
[ ]jp_qRGIaqZ.concise.fasta2015-04-17 16:38 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_qRGIaqZ.concise.pdf2015-04-17 16:38 555KPDF prediction and alignment data
[ ]jp_qRGIaqZ.concise.ps2015-04-17 16:38 9.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_qRGIaqZ.fasta2015-04-17 16:07 156 Input query sequence in FASTA format
[ ]jp_qRGIaqZ.full_MSA.fasta2015-04-17 16:37 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_qRGIaqZ.full_MSA.fasta.noGaps.html2015-04-17 16:38 660KFull MSA before JPred filters in FASTA
[TXT]jp_qRGIaqZ.full_MSA.fasta.withGaps.html2015-04-17 16:38 10MFull MSA before JPred filters in FASTA
[ ]jp_qRGIaqZ.hmm2015-04-17 16:38 27KHHMer2 profile of the alignment
[TXT]jp_qRGIaqZ.html2015-04-17 16:38 195KHTML prediction and alignment data
[ ]jp_qRGIaqZ.input2015-04-17 15:51 149 Raw input data for analysis
[ ]jp_qRGIaqZ.jalview2015-04-17 16:38 3.7KJalview annotation file for alignment
[ ]jp_qRGIaqZ.jnet2015-04-17 16:38 5.2KJnet secondary structure output
[TXT]jp_qRGIaqZ.profile2015-04-17 16:29 23KPSIBLAST profile from alignment
[ ]jp_qRGIaqZ.pssm2015-04-17 16:38 31KPSIBLAST PSSM for Jnet
[TXT]jp_qRGIaqZ.results.html2016-02-15 12:21 66KJPred results page
[TXT]jp_qRGIaqZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qRGIaqZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qRGIaqZ.seq2015-04-17 15:51 156 Sequence data file
[TXT]jp_qRGIaqZ.simple.html2015-04-17 16:38 1.3KBrief HTML: sequence and prediction only
[TXT]jp_qRGIaqZ.svg.html2015-04-17 16:38 58KJalview SVG summary of results
[ ]jp_qRGIaqZ.tar.gz2015-04-17 16:38 3.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.