JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:10 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4a1ia2.name2015-04-17 16:29 0 Job name flag file
[ ]jp_ZuqXyOA.align2015-04-17 17:09 126KPSIBLAST alignment in FASTA format
[TXT]jp_ZuqXyOA.als2015-04-17 17:09 2.6KAlscript command file for PS/PDF output
[ ]jp_ZuqXyOA.blast.gz2015-04-17 17:08 7.7MCompressed PSIBLAST output file
[TXT]jp_ZuqXyOA.coils.csv2015-04-17 17:09 726 COILS output in CSV format
[ ]jp_ZuqXyOA.coilseq.lupas_142015-04-17 17:09 4.9KCOILS output, window length 14
[ ]jp_ZuqXyOA.coilseq.lupas_212015-04-17 17:09 4.9KCOILS output, window length 21
[ ]jp_ZuqXyOA.coilseq.lupas_282015-04-17 17:09 4.9KCOILS output, window length 28
[ ]jp_ZuqXyOA.concise2015-04-17 17:09 245KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZuqXyOA.concise.blc2015-04-17 17:09 126KBLC format prediction and alignment data
[ ]jp_ZuqXyOA.concise.fasta2015-04-17 17:09 127KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZuqXyOA.concise.pdf2015-04-17 17:09 851KPDF prediction and alignment data
[ ]jp_ZuqXyOA.concise.ps2015-04-17 17:09 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_ZuqXyOA.fasta2015-04-17 17:02 130 Input query sequence in FASTA format
[ ]jp_ZuqXyOA.full_MSA.fasta2015-04-17 17:08 18MFull MSA before JPred filters in FASTA
[TXT]jp_ZuqXyOA.full_MSA.fasta.noGaps.html2015-04-17 17:09 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_ZuqXyOA.full_MSA.fasta.withGaps.html2015-04-17 17:09 40MFull MSA before JPred filters in FASTA
[ ]jp_ZuqXyOA.hmm2015-04-17 17:09 22KHHMer2 profile of the alignment
[TXT]jp_ZuqXyOA.html2015-04-17 17:09 319KHTML prediction and alignment data
[ ]jp_ZuqXyOA.input2015-04-17 16:29 123 Raw input data for analysis
[ ]jp_ZuqXyOA.jalview2015-04-17 17:09 3.1KJalview annotation file for alignment
[ ]jp_ZuqXyOA.jnet2015-04-17 17:09 4.3KJnet secondary structure output
[TXT]jp_ZuqXyOA.profile2015-04-17 17:07 19KPSIBLAST profile from alignment
[ ]jp_ZuqXyOA.pssm2015-04-17 17:09 25KPSIBLAST PSSM for Jnet
[TXT]jp_ZuqXyOA.results.html2016-02-15 12:21 56KJPred results page
[TXT]jp_ZuqXyOA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ZuqXyOA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ZuqXyOA.seq2015-04-17 16:29 130 Sequence data file
[TXT]jp_ZuqXyOA.simple.html2015-04-17 17:09 1.3KBrief HTML: sequence and prediction only
[TXT]jp_ZuqXyOA.svg.html2015-04-17 17:10 48KJalview SVG summary of results
[ ]jp_ZuqXyOA.tar.gz2015-04-17 17:10 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.