JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:26 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4a5sa1.name2015-04-17 18:19 0 Job name flag file
[ ]jp_kqAl0wF.align2015-04-17 20:24 351KPSIBLAST alignment in FASTA format
[TXT]jp_kqAl0wF.als2015-04-17 20:24 7.4KAlscript command file for PS/PDF output
[ ]jp_kqAl0wF.blast.gz2015-04-17 20:21 14MCompressed PSIBLAST output file
[TXT]jp_kqAl0wF.coils.csv2015-04-17 20:24 2.8KCOILS output in CSV format
[ ]jp_kqAl0wF.coilseq.lupas_142015-04-17 20:24 20KCOILS output, window length 14
[ ]jp_kqAl0wF.coilseq.lupas_212015-04-17 20:24 20KCOILS output, window length 21
[ ]jp_kqAl0wF.coilseq.lupas_282015-04-17 20:24 20KCOILS output, window length 28
[ ]jp_kqAl0wF.concise2015-04-17 20:24 704KPrediction: coiled-coil, solvent, alignment
[ ]jp_kqAl0wF.concise.blc2015-04-17 20:24 353KBLC format prediction and alignment data
[ ]jp_kqAl0wF.concise.fasta2015-04-17 20:24 356KPrediction: coiled-coil, solvent, alignment
[ ]jp_kqAl0wF.concise.pdf2015-04-17 20:25 2.5MPDF prediction and alignment data
[ ]jp_kqAl0wF.concise.ps2015-04-17 20:24 44MPrediction: coiled-coil, solvent, alignment
[ ]jp_kqAl0wF.fasta2015-04-17 20:10 488 Input query sequence in FASTA format
[ ]jp_kqAl0wF.full_MSA.fasta2015-04-17 20:23 24MFull MSA before JPred filters in FASTA
[TXT]jp_kqAl0wF.full_MSA.fasta.noGaps.html2015-04-17 20:26 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_kqAl0wF.full_MSA.fasta.withGaps.html2015-04-17 20:26 65MFull MSA before JPred filters in FASTA
[ ]jp_kqAl0wF.hmm2015-04-17 20:24 88KHHMer2 profile of the alignment
[TXT]jp_kqAl0wF.html2015-04-17 20:24 522KHTML prediction and alignment data
[ ]jp_kqAl0wF.input2015-04-17 18:19 476 Raw input data for analysis
[ ]jp_kqAl0wF.jalview2015-04-17 20:24 10KJalview annotation file for alignment
[ ]jp_kqAl0wF.jnet2015-04-17 20:24 17KJnet secondary structure output
[TXT]jp_kqAl0wF.profile2015-04-17 20:18 75KPSIBLAST profile from alignment
[ ]jp_kqAl0wF.pssm2015-04-17 20:24 101KPSIBLAST PSSM for Jnet
[TXT]jp_kqAl0wF.results.html2016-02-15 12:21 195KJPred results page
[TXT]jp_kqAl0wF.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_kqAl0wF.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_kqAl0wF.seq2015-04-17 18:19 488 Sequence data file
[TXT]jp_kqAl0wF.simple.html2015-04-17 20:24 2.9KBrief HTML: sequence and prediction only
[TXT]jp_kqAl0wF.svg.html2015-04-17 20:26 187KJalview SVG summary of results
[ ]jp_kqAl0wF.tar.gz2015-04-17 20:26 23MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.