JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:11 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4a8ua_.name2015-04-17 17:06 0 Job name flag file
[ ]jp_Tx4rqSl.align2015-04-17 18:11 180KPSIBLAST alignment in FASTA format
[TXT]jp_Tx4rqSl.als2015-04-17 18:11 3.0KAlscript command file for PS/PDF output
[ ]jp_Tx4rqSl.blast.gz2015-04-17 18:10 510KCompressed PSIBLAST output file
[TXT]jp_Tx4rqSl.coils.csv2015-04-17 18:11 1.0KCOILS output in CSV format
[ ]jp_Tx4rqSl.coilseq.lupas_142015-04-17 18:11 6.6KCOILS output, window length 14
[ ]jp_Tx4rqSl.coilseq.lupas_212015-04-17 18:11 6.6KCOILS output, window length 21
[ ]jp_Tx4rqSl.coilseq.lupas_282015-04-17 18:11 6.6KCOILS output, window length 28
[ ]jp_Tx4rqSl.concise2015-04-17 18:11 351KPrediction: coiled-coil, solvent, alignment
[ ]jp_Tx4rqSl.concise.blc2015-04-17 18:11 179KBLC format prediction and alignment data
[ ]jp_Tx4rqSl.concise.fasta2015-04-17 18:11 182KPrediction: coiled-coil, solvent, alignment
[ ]jp_Tx4rqSl.concise.pdf2015-04-17 18:11 1.2MPDF prediction and alignment data
[ ]jp_Tx4rqSl.concise.ps2015-04-17 18:11 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_Tx4rqSl.fasta2015-04-17 18:08 173 Input query sequence in FASTA format
[ ]jp_Tx4rqSl.full_MSA.fasta2015-04-17 18:10 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_Tx4rqSl.full_MSA.fasta.noGaps.html2015-04-17 18:11 456KFull MSA before JPred filters in FASTA
[TXT]jp_Tx4rqSl.full_MSA.fasta.withGaps.html2015-04-17 18:11 5.2MFull MSA before JPred filters in FASTA
[ ]jp_Tx4rqSl.hmm2015-04-17 18:11 30KHHMer2 profile of the alignment
[TXT]jp_Tx4rqSl.html2015-04-17 18:11 393KHTML prediction and alignment data
[ ]jp_Tx4rqSl.input2015-04-17 17:06 165 Raw input data for analysis
[ ]jp_Tx4rqSl.jalview2015-04-17 18:11 4.0KJalview annotation file for alignment
[ ]jp_Tx4rqSl.jnet2015-04-17 18:11 5.8KJnet secondary structure output
[TXT]jp_Tx4rqSl.profile2015-04-17 18:09 26KPSIBLAST profile from alignment
[ ]jp_Tx4rqSl.pssm2015-04-17 18:11 34KPSIBLAST PSSM for Jnet
[TXT]jp_Tx4rqSl.results.html2016-02-15 12:21 72KJPred results page
[TXT]jp_Tx4rqSl.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Tx4rqSl.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Tx4rqSl.seq2015-04-17 17:06 173 Sequence data file
[TXT]jp_Tx4rqSl.simple.html2015-04-17 18:11 1.4KBrief HTML: sequence and prediction only
[TXT]jp_Tx4rqSl.svg.html2015-04-17 18:11 64KJalview SVG summary of results
[ ]jp_Tx4rqSl.tar.gz2015-04-17 18:11 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.