JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_zUy4Lsc.input2015-04-17 19:32 107 Raw input data for analysis
[ ]jp_zUy4Lsc.seq2015-04-17 19:32 114 Sequence data file
[TXT]d4ac7a_.name2015-04-17 19:32 0 Job name flag file
[ ]jp_zUy4Lsc.fasta2015-04-17 22:14 114 Input query sequence in FASTA format
[TXT]jp_zUy4Lsc.profile2015-04-17 22:19 16KPSIBLAST profile from alignment
[ ]jp_zUy4Lsc.blast.gz2015-04-17 22:19 217KCompressed PSIBLAST output file
[ ]jp_zUy4Lsc.full_MSA.fasta2015-04-17 22:19 231KFull MSA before JPred filters in FASTA
[ ]jp_zUy4Lsc.align2015-04-17 22:20 39KPSIBLAST alignment in FASTA format
[ ]jp_zUy4Lsc.pssm2015-04-17 22:20 21KPSIBLAST PSSM for Jnet
[ ]jp_zUy4Lsc.hmm2015-04-17 22:20 19KHHMer2 profile of the alignment
[ ]jp_zUy4Lsc.jnet2015-04-17 22:20 3.7KJnet secondary structure output
[ ]jp_zUy4Lsc.coilseq.lupas_212015-04-17 22:20 4.2KCOILS output, window length 21
[ ]jp_zUy4Lsc.coilseq.lupas_142015-04-17 22:20 4.2KCOILS output, window length 14
[ ]jp_zUy4Lsc.coilseq.lupas_282015-04-17 22:20 4.2KCOILS output, window length 28
[TXT]jp_zUy4Lsc.coils.csv2015-04-17 22:20 630 COILS output in CSV format
[ ]jp_zUy4Lsc.concise2015-04-17 22:20 78KPrediction: coiled-coil, solvent, alignment
[TXT]jp_zUy4Lsc.html2015-04-17 22:20 115KHTML prediction and alignment data
[TXT]jp_zUy4Lsc.simple.html2015-04-17 22:20 1.2KBrief HTML: sequence and prediction only
[ ]jp_zUy4Lsc.jalview2015-04-17 22:20 2.9KJalview annotation file for alignment
[ ]jp_zUy4Lsc.concise.fasta2015-04-17 22:20 40KPrediction: coiled-coil, solvent, alignment
[ ]jp_zUy4Lsc.concise.blc2015-04-17 22:20 40KBLC format prediction and alignment data
[TXT]jp_zUy4Lsc.als2015-04-17 22:20 2.1KAlscript command file for PS/PDF output
[ ]jp_zUy4Lsc.concise.ps2015-04-17 22:20 4.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_zUy4Lsc.concise.pdf2015-04-17 22:20 261KPDF prediction and alignment data
[TXT]jp_zUy4Lsc.full_MSA.fasta.withGaps.html2015-04-17 22:20 791KFull MSA before JPred filters in FASTA
[TXT]jp_zUy4Lsc.full_MSA.fasta.noGaps.html2015-04-17 22:20 245KFull MSA before JPred filters in FASTA
[TXT]jp_zUy4Lsc.svg.html2015-04-17 22:20 42KJalview SVG summary of results
[TXT]LOG2015-04-17 22:20 4.7KJPred server log file
[ ]jp_zUy4Lsc.tar.gz2015-04-17 22:20 649KArchive containing complete results
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_zUy4Lsc.results.html2016-02-15 12:21 50KJPred results page
[TXT]jp_zUy4Lsc.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zUy4Lsc.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.