JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4ac7b_.name2015-04-17 17:43 0 Job name flag file
[ ]jp_FBSxfzg.align2015-04-17 19:13 110KPSIBLAST alignment in FASTA format
[TXT]jp_FBSxfzg.als2015-04-17 19:13 2.4KAlscript command file for PS/PDF output
[ ]jp_FBSxfzg.blast.gz2015-04-17 19:12 545KCompressed PSIBLAST output file
[TXT]jp_FBSxfzg.coils.csv2015-04-17 19:13 762 COILS output in CSV format
[ ]jp_FBSxfzg.coilseq.lupas_142015-04-17 19:13 5.1KCOILS output, window length 14
[ ]jp_FBSxfzg.coilseq.lupas_212015-04-17 19:13 5.1KCOILS output, window length 21
[ ]jp_FBSxfzg.coilseq.lupas_282015-04-17 19:13 5.1KCOILS output, window length 28
[ ]jp_FBSxfzg.concise2015-04-17 19:13 215KPrediction: coiled-coil, solvent, alignment
[ ]jp_FBSxfzg.concise.blc2015-04-17 19:13 111KBLC format prediction and alignment data
[ ]jp_FBSxfzg.concise.fasta2015-04-17 19:13 112KPrediction: coiled-coil, solvent, alignment
[ ]jp_FBSxfzg.concise.pdf2015-04-17 19:13 688KPDF prediction and alignment data
[ ]jp_FBSxfzg.concise.ps2015-04-17 19:13 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_FBSxfzg.fasta2015-04-17 19:05 136 Input query sequence in FASTA format
[ ]jp_FBSxfzg.full_MSA.fasta2015-04-17 19:12 779KFull MSA before JPred filters in FASTA
[TXT]jp_FBSxfzg.full_MSA.fasta.noGaps.html2015-04-17 19:13 376KFull MSA before JPred filters in FASTA
[TXT]jp_FBSxfzg.full_MSA.fasta.withGaps.html2015-04-17 19:13 2.8MFull MSA before JPred filters in FASTA
[ ]jp_FBSxfzg.hmm2015-04-17 19:13 23KHHMer2 profile of the alignment
[TXT]jp_FBSxfzg.html2015-04-17 19:13 273KHTML prediction and alignment data
[ ]jp_FBSxfzg.input2015-04-17 17:43 129 Raw input data for analysis
[ ]jp_FBSxfzg.jalview2015-04-17 19:13 3.2KJalview annotation file for alignment
[ ]jp_FBSxfzg.jnet2015-04-17 19:13 4.5KJnet secondary structure output
[TXT]jp_FBSxfzg.profile2015-04-17 19:09 20KPSIBLAST profile from alignment
[ ]jp_FBSxfzg.pssm2015-04-17 19:13 26KPSIBLAST PSSM for Jnet
[TXT]jp_FBSxfzg.results.html2016-02-15 12:21 58KJPred results page
[TXT]jp_FBSxfzg.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_FBSxfzg.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_FBSxfzg.seq2015-04-17 17:43 136 Sequence data file
[TXT]jp_FBSxfzg.simple.html2015-04-17 19:13 1.3KBrief HTML: sequence and prediction only
[TXT]jp_FBSxfzg.svg.html2015-04-17 19:13 50KJalview SVG summary of results
[ ]jp_FBSxfzg.tar.gz2015-04-17 19:13 1.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.