JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_vQ1pho_.als2015-04-17 22:18 1.9KAlscript command file for PS/PDF output
[ ]jp_vQ1pho_.tar.gz2015-04-17 22:18 517KArchive containing complete results
[ ]jp_vQ1pho_.concise.blc2015-04-17 22:18 39KBLC format prediction and alignment data
[TXT]jp_vQ1pho_.simple.html2015-04-17 22:18 1.1KBrief HTML: sequence and prediction only
[TXT]jp_vQ1pho_.coils.csv2015-04-17 22:18 510 COILS output in CSV format
[ ]jp_vQ1pho_.coilseq.lupas_142015-04-17 22:18 3.4KCOILS output, window length 14
[ ]jp_vQ1pho_.coilseq.lupas_212015-04-17 22:18 3.4KCOILS output, window length 21
[ ]jp_vQ1pho_.coilseq.lupas_282015-04-17 22:18 3.4KCOILS output, window length 28
[ ]jp_vQ1pho_.blast.gz2015-04-17 22:17 148KCompressed PSIBLAST output file
[ ]jp_vQ1pho_.full_MSA.fasta2015-04-17 22:18 177KFull MSA before JPred filters in FASTA
[TXT]jp_vQ1pho_.full_MSA.fasta.noGaps.html2015-04-17 22:18 126KFull MSA before JPred filters in FASTA
[TXT]jp_vQ1pho_.full_MSA.fasta.withGaps.html2015-04-17 22:18 869KFull MSA before JPred filters in FASTA
[ ]jp_vQ1pho_.hmm2015-04-17 22:18 15KHHMer2 profile of the alignment
[TXT]jp_vQ1pho_.html2015-04-17 22:18 122KHTML prediction and alignment data
[TXT]jp_vQ1pho_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_vQ1pho_.fasta2015-04-17 22:15 94 Input query sequence in FASTA format
[TXT]jp_vQ1pho_.results.html2016-02-15 12:21 42KJPred results page
[TXT]LOG2015-04-17 22:18 4.7KJPred server log file
[TXT]jp_vQ1pho_.svg.html2015-04-17 22:18 33KJalview SVG summary of results
[ ]jp_vQ1pho_.jalview2015-04-17 22:18 2.4KJalview annotation file for alignment
[TXT]jp_vQ1pho_.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_vQ1pho_.jnet2015-04-17 22:18 3.0KJnet secondary structure output
[TXT]d4agha_.name2015-04-17 19:33 0 Job name flag file
[ ]jp_vQ1pho_.concise.pdf2015-04-17 22:18 222KPDF prediction and alignment data
[ ]jp_vQ1pho_.pssm2015-04-17 22:18 17KPSIBLAST PSSM for Jnet
[ ]jp_vQ1pho_.align2015-04-17 22:18 38KPSIBLAST alignment in FASTA format
[TXT]jp_vQ1pho_.profile2015-04-17 22:17 13KPSIBLAST profile from alignment
[ ]jp_vQ1pho_.concise2015-04-17 22:18 75KPrediction: coiled-coil, solvent, alignment
[ ]jp_vQ1pho_.concise.fasta2015-04-17 22:18 39KPrediction: coiled-coil, solvent, alignment
[ ]jp_vQ1pho_.concise.ps2015-04-17 22:18 4.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_vQ1pho_.input2015-04-17 19:33 87 Raw input data for analysis
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[ ]jp_vQ1pho_.seq2015-04-17 19:33 94 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.