JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:14 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4aiwa_.name2015-04-17 17:43 0 Job name flag file
[ ]jp_VFYaS6g.align2015-04-17 19:13 155KPSIBLAST alignment in FASTA format
[TXT]jp_VFYaS6g.als2015-04-17 19:13 2.2KAlscript command file for PS/PDF output
[ ]jp_VFYaS6g.blast.gz2015-04-17 19:12 5.8MCompressed PSIBLAST output file
[TXT]jp_VFYaS6g.coils.csv2015-04-17 19:13 936 COILS output in CSV format
[ ]jp_VFYaS6g.coilseq.lupas_142015-04-17 19:13 6.3KCOILS output, window length 14
[ ]jp_VFYaS6g.coilseq.lupas_212015-04-17 19:13 6.3KCOILS output, window length 21
[ ]jp_VFYaS6g.coilseq.lupas_282015-04-17 19:13 6.3KCOILS output, window length 28
[ ]jp_VFYaS6g.concise2015-04-17 19:13 302KPrediction: coiled-coil, solvent, alignment
[ ]jp_VFYaS6g.concise.blc2015-04-17 19:13 154KBLC format prediction and alignment data
[ ]jp_VFYaS6g.concise.fasta2015-04-17 19:13 156KPrediction: coiled-coil, solvent, alignment
[ ]jp_VFYaS6g.concise.pdf2015-04-17 19:13 1.0MPDF prediction and alignment data
[ ]jp_VFYaS6g.concise.ps2015-04-17 19:13 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_VFYaS6g.fasta2015-04-17 19:05 166 Input query sequence in FASTA format
[ ]jp_VFYaS6g.full_MSA.fasta2015-04-17 19:13 10MFull MSA before JPred filters in FASTA
[TXT]jp_VFYaS6g.full_MSA.fasta.noGaps.html2015-04-17 19:14 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_VFYaS6g.full_MSA.fasta.withGaps.html2015-04-17 19:14 25MFull MSA before JPred filters in FASTA
[ ]jp_VFYaS6g.hmm2015-04-17 19:13 28KHHMer2 profile of the alignment
[TXT]jp_VFYaS6g.html2015-04-17 19:13 344KHTML prediction and alignment data
[ ]jp_VFYaS6g.input2015-04-17 17:43 158 Raw input data for analysis
[ ]jp_VFYaS6g.jalview2015-04-17 19:13 3.8KJalview annotation file for alignment
[ ]jp_VFYaS6g.jnet2015-04-17 19:13 5.6KJnet secondary structure output
[TXT]jp_VFYaS6g.profile2015-04-17 19:11 24KPSIBLAST profile from alignment
[ ]jp_VFYaS6g.pssm2015-04-17 19:13 32KPSIBLAST PSSM for Jnet
[TXT]jp_VFYaS6g.results.html2016-02-15 12:21 68KJPred results page
[TXT]jp_VFYaS6g.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_VFYaS6g.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_VFYaS6g.seq2015-04-17 17:43 166 Sequence data file
[TXT]jp_VFYaS6g.simple.html2015-04-17 19:13 1.3KBrief HTML: sequence and prediction only
[TXT]jp_VFYaS6g.svg.html2015-04-17 19:14 60KJalview SVG summary of results
[ ]jp_VFYaS6g.tar.gz2015-04-17 19:14 9.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.