JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:14 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4al0a_.name2015-04-17 17:06 0 Job name flag file
[ ]jp_KDrmuOx.align2015-04-17 18:13 46KPSIBLAST alignment in FASTA format
[TXT]jp_KDrmuOx.als2015-04-17 18:13 2.0KAlscript command file for PS/PDF output
[ ]jp_KDrmuOx.blast.gz2015-04-17 18:13 168KCompressed PSIBLAST output file
[TXT]jp_KDrmuOx.coils.csv2015-04-17 18:13 906 COILS output in CSV format
[ ]jp_KDrmuOx.coilseq.lupas_142015-04-17 18:13 6.1KCOILS output, window length 14
[ ]jp_KDrmuOx.coilseq.lupas_212015-04-17 18:13 6.1KCOILS output, window length 21
[ ]jp_KDrmuOx.coilseq.lupas_282015-04-17 18:13 6.1KCOILS output, window length 28
[ ]jp_KDrmuOx.concise2015-04-17 18:13 94KPrediction: coiled-coil, solvent, alignment
[ ]jp_KDrmuOx.concise.blc2015-04-17 18:13 47KBLC format prediction and alignment data
[ ]jp_KDrmuOx.concise.fasta2015-04-17 18:13 48KPrediction: coiled-coil, solvent, alignment
[ ]jp_KDrmuOx.concise.pdf2015-04-17 18:14 326KPDF prediction and alignment data
[ ]jp_KDrmuOx.concise.ps2015-04-17 18:13 5.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_KDrmuOx.fasta2015-04-17 18:08 161 Input query sequence in FASTA format
[ ]jp_KDrmuOx.full_MSA.fasta2015-04-17 18:13 272KFull MSA before JPred filters in FASTA
[TXT]jp_KDrmuOx.full_MSA.fasta.noGaps.html2015-04-17 18:14 120KFull MSA before JPred filters in FASTA
[TXT]jp_KDrmuOx.full_MSA.fasta.withGaps.html2015-04-17 18:14 890KFull MSA before JPred filters in FASTA
[ ]jp_KDrmuOx.hmm2015-04-17 18:13 27KHHMer2 profile of the alignment
[TXT]jp_KDrmuOx.html2015-04-17 18:13 118KHTML prediction and alignment data
[ ]jp_KDrmuOx.input2015-04-17 17:06 153 Raw input data for analysis
[ ]jp_KDrmuOx.jalview2015-04-17 18:13 3.8KJalview annotation file for alignment
[ ]jp_KDrmuOx.jnet2015-04-17 18:13 5.4KJnet secondary structure output
[TXT]jp_KDrmuOx.profile2015-04-17 18:11 24KPSIBLAST profile from alignment
[ ]jp_KDrmuOx.pssm2015-04-17 18:13 31KPSIBLAST PSSM for Jnet
[TXT]jp_KDrmuOx.results.html2016-02-15 12:21 66KJPred results page
[TXT]jp_KDrmuOx.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KDrmuOx.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KDrmuOx.seq2015-04-17 17:06 161 Sequence data file
[TXT]jp_KDrmuOx.simple.html2015-04-17 18:13 1.3KBrief HTML: sequence and prediction only
[TXT]jp_KDrmuOx.svg.html2015-04-17 18:14 58KJalview SVG summary of results
[ ]jp_KDrmuOx.tar.gz2015-04-17 18:14 682KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.