JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:18 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4dhla1.name2015-04-17 18:20 0 Job name flag file
[ ]jp_LyfZsRQ.align2015-04-17 20:18 106KPSIBLAST alignment in FASTA format
[TXT]jp_LyfZsRQ.als2015-04-17 20:18 2.3KAlscript command file for PS/PDF output
[ ]jp_LyfZsRQ.blast.gz2015-04-17 20:17 1.0MCompressed PSIBLAST output file
[TXT]jp_LyfZsRQ.coils.csv2015-04-17 20:18 708 COILS output in CSV format
[ ]jp_LyfZsRQ.coilseq.lupas_142015-04-17 20:18 4.7KCOILS output, window length 14
[ ]jp_LyfZsRQ.coilseq.lupas_212015-04-17 20:18 4.7KCOILS output, window length 21
[ ]jp_LyfZsRQ.coilseq.lupas_282015-04-17 20:18 4.7KCOILS output, window length 28
[ ]jp_LyfZsRQ.concise2015-04-17 20:18 205KPrediction: coiled-coil, solvent, alignment
[ ]jp_LyfZsRQ.concise.blc2015-04-17 20:18 106KBLC format prediction and alignment data
[ ]jp_LyfZsRQ.concise.fasta2015-04-17 20:18 107KPrediction: coiled-coil, solvent, alignment
[ ]jp_LyfZsRQ.concise.pdf2015-04-17 20:18 640KPDF prediction and alignment data
[ ]jp_LyfZsRQ.concise.ps2015-04-17 20:18 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_LyfZsRQ.fasta2015-04-17 20:11 127 Input query sequence in FASTA format
[ ]jp_LyfZsRQ.full_MSA.fasta2015-04-17 20:18 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_LyfZsRQ.full_MSA.fasta.noGaps.html2015-04-17 20:18 493KFull MSA before JPred filters in FASTA
[TXT]jp_LyfZsRQ.full_MSA.fasta.withGaps.html2015-04-17 20:18 7.4MFull MSA before JPred filters in FASTA
[ ]jp_LyfZsRQ.hmm2015-04-17 20:18 21KHHMer2 profile of the alignment
[TXT]jp_LyfZsRQ.html2015-04-17 20:18 272KHTML prediction and alignment data
[ ]jp_LyfZsRQ.input2015-04-17 18:20 120 Raw input data for analysis
[ ]jp_LyfZsRQ.jalview2015-04-17 20:18 3.1KJalview annotation file for alignment
[ ]jp_LyfZsRQ.jnet2015-04-17 20:18 4.2KJnet secondary structure output
[TXT]jp_LyfZsRQ.profile2015-04-17 20:15 18KPSIBLAST profile from alignment
[ ]jp_LyfZsRQ.pssm2015-04-17 20:18 24KPSIBLAST PSSM for Jnet
[TXT]jp_LyfZsRQ.results.html2016-02-15 12:21 53KJPred results page
[TXT]jp_LyfZsRQ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_LyfZsRQ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_LyfZsRQ.seq2015-04-17 18:20 127 Sequence data file
[TXT]jp_LyfZsRQ.simple.html2015-04-17 20:18 1.3KBrief HTML: sequence and prediction only
[TXT]jp_LyfZsRQ.svg.html2015-04-17 20:18 45KJalview SVG summary of results
[ ]jp_LyfZsRQ.tar.gz2015-04-17 20:18 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.