JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4dnda_.name2015-04-17 15:52 0 Job name flag file
[ ]jp_t3AQxef.align2015-04-17 16:09 31KPSIBLAST alignment in FASTA format
[TXT]jp_t3AQxef.als2015-04-17 16:09 1.6KAlscript command file for PS/PDF output
[ ]jp_t3AQxef.blast.gz2015-04-17 16:09 155KCompressed PSIBLAST output file
[TXT]jp_t3AQxef.coils.csv2015-04-17 16:09 600 COILS output in CSV format
[ ]jp_t3AQxef.coilseq.lupas_142015-04-17 16:09 4.0KCOILS output, window length 14
[ ]jp_t3AQxef.coilseq.lupas_212015-04-17 16:09 4.0KCOILS output, window length 21
[ ]jp_t3AQxef.coilseq.lupas_282015-04-17 16:09 4.0KCOILS output, window length 28
[ ]jp_t3AQxef.concise2015-04-17 16:09 62KPrediction: coiled-coil, solvent, alignment
[ ]jp_t3AQxef.concise.blc2015-04-17 16:09 31KBLC format prediction and alignment data
[ ]jp_t3AQxef.concise.fasta2015-04-17 16:09 32KPrediction: coiled-coil, solvent, alignment
[ ]jp_t3AQxef.concise.pdf2015-04-17 16:09 198KPDF prediction and alignment data
[ ]jp_t3AQxef.concise.ps2015-04-17 16:09 3.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_t3AQxef.fasta2015-04-17 16:07 109 Input query sequence in FASTA format
[ ]jp_t3AQxef.full_MSA.fasta2015-04-17 16:09 312KFull MSA before JPred filters in FASTA
[TXT]jp_t3AQxef.full_MSA.fasta.noGaps.html2015-04-17 16:09 114KFull MSA before JPred filters in FASTA
[TXT]jp_t3AQxef.full_MSA.fasta.withGaps.html2015-04-17 16:09 935KFull MSA before JPred filters in FASTA
[ ]jp_t3AQxef.hmm2015-04-17 16:09 18KHHMer2 profile of the alignment
[TXT]jp_t3AQxef.html2015-04-17 16:09 96KHTML prediction and alignment data
[ ]jp_t3AQxef.input2015-04-17 15:52 102 Raw input data for analysis
[ ]jp_t3AQxef.jalview2015-04-17 16:09 2.8KJalview annotation file for alignment
[ ]jp_t3AQxef.jnet2015-04-17 16:09 3.5KJnet secondary structure output
[TXT]jp_t3AQxef.profile2015-04-17 16:08 16KPSIBLAST profile from alignment
[ ]jp_t3AQxef.pssm2015-04-17 16:09 20KPSIBLAST PSSM for Jnet
[TXT]jp_t3AQxef.results.html2016-02-15 12:21 46KJPred results page
[TXT]jp_t3AQxef.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_t3AQxef.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_t3AQxef.seq2015-04-17 15:52 109 Sequence data file
[TXT]jp_t3AQxef.simple.html2015-04-17 16:09 1.1KBrief HTML: sequence and prediction only
[TXT]jp_t3AQxef.svg.html2015-04-17 16:09 38KJalview SVG summary of results
[ ]jp_t3AQxef.tar.gz2015-04-17 16:09 499KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.