JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_2lzie6v.input2015-04-17 16:29 228 Raw input data for analysis
[ ]jp_2lzie6v.seq2015-04-17 16:29 237 Sequence data file
[TXT]d4doia_.name2015-04-17 16:29 0 Job name flag file
[ ]jp_2lzie6v.fasta2015-04-17 17:03 237 Input query sequence in FASTA format
[TXT]jp_2lzie6v.profile2015-04-17 17:06 35KPSIBLAST profile from alignment
[ ]jp_2lzie6v.blast.gz2015-04-17 17:07 439KCompressed PSIBLAST output file
[ ]jp_2lzie6v.full_MSA.fasta2015-04-17 17:07 1.4MFull MSA before JPred filters in FASTA
[ ]jp_2lzie6v.align2015-04-17 17:07 123KPSIBLAST alignment in FASTA format
[ ]jp_2lzie6v.pssm2015-04-17 17:07 47KPSIBLAST PSSM for Jnet
[ ]jp_2lzie6v.hmm2015-04-17 17:07 41KHHMer2 profile of the alignment
[ ]jp_2lzie6v.jnet2015-04-17 17:07 8.1KJnet secondary structure output
[ ]jp_2lzie6v.coilseq.lupas_212015-04-17 17:07 9.3KCOILS output, window length 21
[ ]jp_2lzie6v.coilseq.lupas_142015-04-17 17:07 9.3KCOILS output, window length 14
[ ]jp_2lzie6v.coilseq.lupas_282015-04-17 17:07 9.3KCOILS output, window length 28
[TXT]jp_2lzie6v.coils.csv2015-04-17 17:07 1.3KCOILS output in CSV format
[ ]jp_2lzie6v.concise2015-04-17 17:07 247KPrediction: coiled-coil, solvent, alignment
[TXT]jp_2lzie6v.html2015-04-17 17:07 244KHTML prediction and alignment data
[TXT]jp_2lzie6v.simple.html2015-04-17 17:07 1.6KBrief HTML: sequence and prediction only
[ ]jp_2lzie6v.jalview2015-04-17 17:07 5.3KJalview annotation file for alignment
[ ]jp_2lzie6v.concise.fasta2015-04-17 17:07 125KPrediction: coiled-coil, solvent, alignment
[ ]jp_2lzie6v.concise.blc2015-04-17 17:07 124KBLC format prediction and alignment data
[TXT]jp_2lzie6v.als2015-04-17 17:07 3.3KAlscript command file for PS/PDF output
[ ]jp_2lzie6v.concise.ps2015-04-17 17:07 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_2lzie6v.concise.pdf2015-04-17 17:07 835KPDF prediction and alignment data
[TXT]jp_2lzie6v.full_MSA.fasta.withGaps.html2015-04-17 17:07 4.6MFull MSA before JPred filters in FASTA
[TXT]jp_2lzie6v.full_MSA.fasta.noGaps.html2015-04-17 17:07 260KFull MSA before JPred filters in FASTA
[TXT]jp_2lzie6v.svg.html2015-04-17 17:07 89KJalview SVG summary of results
[TXT]LOG2015-04-17 17:07 4.7KJPred server log file
[ ]jp_2lzie6v.tar.gz2015-04-17 17:07 1.8MArchive containing complete results
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_2lzie6v.results.html2016-02-15 12:21 97KJPred results page
[TXT]jp_2lzie6v.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_2lzie6v.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.