JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 23:37 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4duia_.name2015-04-17 19:33 0 Job name flag file
[ ]jp_MsINA2Q.align2015-04-17 23:26 155KPSIBLAST alignment in FASTA format
[TXT]jp_MsINA2Q.als2015-04-17 23:26 2.7KAlscript command file for PS/PDF output
[ ]jp_MsINA2Q.blast.gz2015-04-17 23:02 176MCompressed PSIBLAST output file
[TXT]jp_MsINA2Q.coils.csv2015-04-17 23:26 1.0KCOILS output in CSV format
[ ]jp_MsINA2Q.coilseq.lupas_142015-04-17 23:26 6.9KCOILS output, window length 14
[ ]jp_MsINA2Q.coilseq.lupas_212015-04-17 23:26 6.9KCOILS output, window length 21
[ ]jp_MsINA2Q.coilseq.lupas_282015-04-17 23:26 6.9KCOILS output, window length 28
[ ]jp_MsINA2Q.concise2015-04-17 23:26 304KPrediction: coiled-coil, solvent, alignment
[ ]jp_MsINA2Q.concise.blc2015-04-17 23:26 155KBLC format prediction and alignment data
[ ]jp_MsINA2Q.concise.fasta2015-04-17 23:26 157KPrediction: coiled-coil, solvent, alignment
[ ]jp_MsINA2Q.concise.pdf2015-04-17 23:26 1.1MPDF prediction and alignment data
[ ]jp_MsINA2Q.concise.ps2015-04-17 23:26 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_MsINA2Q.fasta2015-04-17 22:16 179 Input query sequence in FASTA format
[ ]jp_MsINA2Q.full_MSA.fasta2015-04-17 23:19 502MFull MSA before JPred filters in FASTA
[TXT]jp_MsINA2Q.full_MSA.fasta.noGaps.html2015-04-17 23:37 21MFull MSA before JPred filters in FASTA
[TXT]jp_MsINA2Q.full_MSA.fasta.withGaps.html2015-04-17 23:37 787MFull MSA before JPred filters in FASTA
[ ]jp_MsINA2Q.hmm2015-04-17 23:26 31KHHMer2 profile of the alignment
[TXT]jp_MsINA2Q.html2015-04-17 23:26 336KHTML prediction and alignment data
[ ]jp_MsINA2Q.input2015-04-17 19:33 171 Raw input data for analysis
[ ]jp_MsINA2Q.jalview2015-04-17 23:26 4.1KJalview annotation file for alignment
[ ]jp_MsINA2Q.jnet2015-04-17 23:26 6.0KJnet secondary structure output
[TXT]jp_MsINA2Q.profile2015-04-17 22:58 26KPSIBLAST profile from alignment
[ ]jp_MsINA2Q.pssm2015-04-17 23:26 35KPSIBLAST PSSM for Jnet
[TXT]jp_MsINA2Q.results.html2016-02-15 12:21 76KJPred results page
[TXT]jp_MsINA2Q.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_MsINA2Q.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_MsINA2Q.seq2015-04-17 19:33 179 Sequence data file
[TXT]jp_MsINA2Q.simple.html2015-04-17 23:26 1.4KBrief HTML: sequence and prediction only
[TXT]jp_MsINA2Q.svg.html2015-04-17 23:37 68KJalview SVG summary of results
[ ]jp_MsINA2Q.tar.gz2015-04-17 23:38 227MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.