JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:21 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4e2va_.name2015-04-17 18:20 0 Job name flag file
[ ]jp_1JMTcwA.align2015-04-17 20:20 282KPSIBLAST alignment in FASTA format
[TXT]jp_1JMTcwA.als2015-04-17 20:20 4.7KAlscript command file for PS/PDF output
[ ]jp_1JMTcwA.blast.gz2015-04-17 20:18 8.0MCompressed PSIBLAST output file
[TXT]jp_1JMTcwA.coils.csv2015-04-17 20:20 2.2KCOILS output in CSV format
[ ]jp_1JMTcwA.coilseq.lupas_142015-04-17 20:20 15KCOILS output, window length 14
[ ]jp_1JMTcwA.coilseq.lupas_212015-04-17 20:20 15KCOILS output, window length 21
[ ]jp_1JMTcwA.coilseq.lupas_282015-04-17 20:20 15KCOILS output, window length 28
[ ]jp_1JMTcwA.concise2015-04-17 20:20 563KPrediction: coiled-coil, solvent, alignment
[ ]jp_1JMTcwA.concise.blc2015-04-17 20:20 283KBLC format prediction and alignment data
[ ]jp_1JMTcwA.concise.fasta2015-04-17 20:20 285KPrediction: coiled-coil, solvent, alignment
[ ]jp_1JMTcwA.concise.pdf2015-04-17 20:20 2.0MPDF prediction and alignment data
[ ]jp_1JMTcwA.concise.ps2015-04-17 20:20 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_1JMTcwA.fasta2015-04-17 20:11 382 Input query sequence in FASTA format
[ ]jp_1JMTcwA.full_MSA.fasta2015-04-17 20:19 17MFull MSA before JPred filters in FASTA
[TXT]jp_1JMTcwA.full_MSA.fasta.noGaps.html2015-04-17 20:21 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_1JMTcwA.full_MSA.fasta.withGaps.html2015-04-17 20:21 45MFull MSA before JPred filters in FASTA
[ ]jp_1JMTcwA.hmm2015-04-17 20:20 68KHHMer2 profile of the alignment
[TXT]jp_1JMTcwA.html2015-04-17 20:20 454KHTML prediction and alignment data
[ ]jp_1JMTcwA.input2015-04-17 18:20 371 Raw input data for analysis
[ ]jp_1JMTcwA.jalview2015-04-17 20:20 8.1KJalview annotation file for alignment
[ ]jp_1JMTcwA.jnet2015-04-17 20:20 13KJnet secondary structure output
[TXT]jp_1JMTcwA.profile2015-04-17 20:17 58KPSIBLAST profile from alignment
[ ]jp_1JMTcwA.pssm2015-04-17 20:20 78KPSIBLAST PSSM for Jnet
[TXT]jp_1JMTcwA.results.html2016-02-15 12:21 153KJPred results page
[TXT]jp_1JMTcwA.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_1JMTcwA.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_1JMTcwA.seq2015-04-17 18:20 382 Sequence data file
[TXT]jp_1JMTcwA.simple.html2015-04-17 20:20 2.1KBrief HTML: sequence and prediction only
[TXT]jp_1JMTcwA.svg.html2015-04-17 20:21 145KJalview SVG summary of results
[ ]jp_1JMTcwA.tar.gz2015-04-17 20:21 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.