JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4e3ya_.name2015-04-17 17:43 0 Job name flag file
[ ]jp_C9fel1P.align2015-04-17 19:12 276KPSIBLAST alignment in FASTA format
[TXT]jp_C9fel1P.als2015-04-17 19:12 3.3KAlscript command file for PS/PDF output
[ ]jp_C9fel1P.blast.gz2015-04-17 19:10 4.6MCompressed PSIBLAST output file
[TXT]jp_C9fel1P.coils.csv2015-04-17 19:12 1.4KCOILS output in CSV format
[ ]jp_C9fel1P.coilseq.lupas_142015-04-17 19:12 10KCOILS output, window length 14
[ ]jp_C9fel1P.coilseq.lupas_212015-04-17 19:12 10KCOILS output, window length 21
[ ]jp_C9fel1P.coilseq.lupas_282015-04-17 19:12 10KCOILS output, window length 28
[ ]jp_C9fel1P.concise2015-04-17 19:12 544KPrediction: coiled-coil, solvent, alignment
[ ]jp_C9fel1P.concise.blc2015-04-17 19:12 276KBLC format prediction and alignment data
[ ]jp_C9fel1P.concise.fasta2015-04-17 19:12 279KPrediction: coiled-coil, solvent, alignment
[ ]jp_C9fel1P.concise.pdf2015-04-17 19:12 1.8MPDF prediction and alignment data
[ ]jp_C9fel1P.concise.ps2015-04-17 19:12 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_C9fel1P.fasta2015-04-17 19:07 256 Input query sequence in FASTA format
[ ]jp_C9fel1P.full_MSA.fasta2015-04-17 19:11 10MFull MSA before JPred filters in FASTA
[TXT]jp_C9fel1P.full_MSA.fasta.noGaps.html2015-04-17 19:13 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_C9fel1P.full_MSA.fasta.withGaps.html2015-04-17 19:13 25MFull MSA before JPred filters in FASTA
[ ]jp_C9fel1P.hmm2015-04-17 19:12 45KHHMer2 profile of the alignment
[TXT]jp_C9fel1P.html2015-04-17 19:12 501KHTML prediction and alignment data
[ ]jp_C9fel1P.input2015-04-17 17:43 247 Raw input data for analysis
[ ]jp_C9fel1P.jalview2015-04-17 19:12 5.5KJalview annotation file for alignment
[ ]jp_C9fel1P.jnet2015-04-17 19:12 8.8KJnet secondary structure output
[TXT]jp_C9fel1P.profile2015-04-17 19:09 38KPSIBLAST profile from alignment
[ ]jp_C9fel1P.pssm2015-04-17 19:12 52KPSIBLAST PSSM for Jnet
[TXT]jp_C9fel1P.results.html2016-02-15 12:21 102KJPred results page
[TXT]jp_C9fel1P.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_C9fel1P.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_C9fel1P.seq2015-04-17 17:43 256 Sequence data file
[TXT]jp_C9fel1P.simple.html2015-04-17 19:12 1.6KBrief HTML: sequence and prediction only
[TXT]jp_C9fel1P.svg.html2015-04-17 19:13 94KJalview SVG summary of results
[ ]jp_C9fel1P.tar.gz2015-04-17 19:13 9.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.