JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:14 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4eada3.name2015-04-17 17:44 0 Job name flag file
[ ]jp_laFIWt0.align2015-04-17 19:14 194KPSIBLAST alignment in FASTA format
[TXT]jp_laFIWt0.als2015-04-17 19:14 2.6KAlscript command file for PS/PDF output
[ ]jp_laFIWt0.blast.gz2015-04-17 19:12 561KCompressed PSIBLAST output file
[TXT]jp_laFIWt0.coils.csv2015-04-17 19:14 660 COILS output in CSV format
[ ]jp_laFIWt0.coilseq.lupas_142015-04-17 19:14 4.4KCOILS output, window length 14
[ ]jp_laFIWt0.coilseq.lupas_212015-04-17 19:14 4.4KCOILS output, window length 21
[ ]jp_laFIWt0.coilseq.lupas_282015-04-17 19:14 4.4KCOILS output, window length 28
[ ]jp_laFIWt0.concise2015-04-17 19:14 372KPrediction: coiled-coil, solvent, alignment
[ ]jp_laFIWt0.concise.blc2015-04-17 19:14 193KBLC format prediction and alignment data
[ ]jp_laFIWt0.concise.fasta2015-04-17 19:14 195KPrediction: coiled-coil, solvent, alignment
[ ]jp_laFIWt0.concise.pdf2015-04-17 19:14 1.2MPDF prediction and alignment data
[ ]jp_laFIWt0.concise.ps2015-04-17 19:14 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_laFIWt0.fasta2015-04-17 19:08 119 Input query sequence in FASTA format
[ ]jp_laFIWt0.full_MSA.fasta2015-04-17 19:12 640KFull MSA before JPred filters in FASTA
[TXT]jp_laFIWt0.full_MSA.fasta.noGaps.html2015-04-17 19:14 466KFull MSA before JPred filters in FASTA
[TXT]jp_laFIWt0.full_MSA.fasta.withGaps.html2015-04-17 19:14 3.2MFull MSA before JPred filters in FASTA
[ ]jp_laFIWt0.hmm2015-04-17 19:14 20KHHMer2 profile of the alignment
[TXT]jp_laFIWt0.html2015-04-17 19:14 509KHTML prediction and alignment data
[ ]jp_laFIWt0.input2015-04-17 17:44 112 Raw input data for analysis
[ ]jp_laFIWt0.jalview2015-04-17 19:14 2.9KJalview annotation file for alignment
[ ]jp_laFIWt0.jnet2015-04-17 19:14 3.9KJnet secondary structure output
[TXT]jp_laFIWt0.profile2015-04-17 19:10 17KPSIBLAST profile from alignment
[ ]jp_laFIWt0.pssm2015-04-17 19:14 23KPSIBLAST PSSM for Jnet
[TXT]jp_laFIWt0.results.html2016-02-15 12:21 52KJPred results page
[TXT]jp_laFIWt0.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_laFIWt0.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_laFIWt0.seq2015-04-17 17:44 119 Sequence data file
[TXT]jp_laFIWt0.simple.html2015-04-17 19:14 1.3KBrief HTML: sequence and prediction only
[TXT]jp_laFIWt0.svg.html2015-04-17 19:14 44KJalview SVG summary of results
[ ]jp_laFIWt0.tar.gz2015-04-17 19:14 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.