JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:24 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4enea_.name2015-04-17 16:29 0 Job name flag file
[ ]jp_ewzbjsF.align2015-04-17 17:22 250KPSIBLAST alignment in FASTA format
[TXT]jp_ewzbjsF.als2015-04-17 17:23 4.1KAlscript command file for PS/PDF output
[ ]jp_ewzbjsF.blast.gz2015-04-17 17:14 11MCompressed PSIBLAST output file
[TXT]jp_ewzbjsF.coils.csv2015-04-17 17:22 2.6KCOILS output in CSV format
[ ]jp_ewzbjsF.coilseq.lupas_142015-04-17 17:22 19KCOILS output, window length 14
[ ]jp_ewzbjsF.coilseq.lupas_212015-04-17 17:22 19KCOILS output, window length 21
[ ]jp_ewzbjsF.coilseq.lupas_282015-04-17 17:22 19KCOILS output, window length 28
[ ]jp_ewzbjsF.concise2015-04-17 17:22 507KPrediction: coiled-coil, solvent, alignment
[ ]jp_ewzbjsF.concise.blc2015-04-17 17:23 253KBLC format prediction and alignment data
[ ]jp_ewzbjsF.concise.fasta2015-04-17 17:23 255KPrediction: coiled-coil, solvent, alignment
[ ]jp_ewzbjsF.concise.pdf2015-04-17 17:23 1.8MPDF prediction and alignment data
[ ]jp_ewzbjsF.concise.ps2015-04-17 17:23 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_ewzbjsF.fasta2015-04-17 17:04 463 Input query sequence in FASTA format
[ ]jp_ewzbjsF.full_MSA.fasta2015-04-17 17:21 24MFull MSA before JPred filters in FASTA
[TXT]jp_ewzbjsF.full_MSA.fasta.noGaps.html2015-04-17 17:24 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_ewzbjsF.full_MSA.fasta.withGaps.html2015-04-17 17:24 62MFull MSA before JPred filters in FASTA
[ ]jp_ewzbjsF.hmm2015-04-17 17:22 83KHHMer2 profile of the alignment
[TXT]jp_ewzbjsF.html2015-04-17 17:22 405KHTML prediction and alignment data
[ ]jp_ewzbjsF.input2015-04-17 16:29 451 Raw input data for analysis
[ ]jp_ewzbjsF.jalview2015-04-17 17:22 10KJalview annotation file for alignment
[ ]jp_ewzbjsF.jnet2015-04-17 17:22 16KJnet secondary structure output
[TXT]jp_ewzbjsF.profile2015-04-17 17:11 71KPSIBLAST profile from alignment
[ ]jp_ewzbjsF.pssm2015-04-17 17:22 95KPSIBLAST PSSM for Jnet
[TXT]jp_ewzbjsF.results.html2016-02-15 12:21 182KJPred results page
[TXT]jp_ewzbjsF.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_ewzbjsF.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_ewzbjsF.seq2015-04-17 16:29 463 Sequence data file
[TXT]jp_ewzbjsF.simple.html2015-04-17 17:22 2.2KBrief HTML: sequence and prediction only
[TXT]jp_ewzbjsF.svg.html2015-04-17 17:24 174KJalview SVG summary of results
[ ]jp_ewzbjsF.tar.gz2015-04-17 17:24 19MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.