JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4esma_.name2015-04-17 15:52 0 Job name flag file
[ ]jp_aJ8XflD.align2015-04-17 16:15 156KPSIBLAST alignment in FASTA format
[TXT]jp_aJ8XflD.als2015-04-17 16:15 4.2KAlscript command file for PS/PDF output
[ ]jp_aJ8XflD.blast.gz2015-04-17 16:14 1.2MCompressed PSIBLAST output file
[TXT]jp_aJ8XflD.coils.csv2015-04-17 16:15 1.6KCOILS output in CSV format
[ ]jp_aJ8XflD.coilseq.lupas_142015-04-17 16:15 12KCOILS output, window length 14
[ ]jp_aJ8XflD.coilseq.lupas_212015-04-17 16:15 12KCOILS output, window length 21
[ ]jp_aJ8XflD.coilseq.lupas_282015-04-17 16:15 12KCOILS output, window length 28
[ ]jp_aJ8XflD.concise2015-04-17 16:15 315KPrediction: coiled-coil, solvent, alignment
[ ]jp_aJ8XflD.concise.blc2015-04-17 16:15 158KBLC format prediction and alignment data
[ ]jp_aJ8XflD.concise.fasta2015-04-17 16:15 159KPrediction: coiled-coil, solvent, alignment
[ ]jp_aJ8XflD.concise.pdf2015-04-17 16:15 1.1MPDF prediction and alignment data
[ ]jp_aJ8XflD.concise.ps2015-04-17 16:15 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_aJ8XflD.fasta2015-04-17 16:09 292 Input query sequence in FASTA format
[ ]jp_aJ8XflD.full_MSA.fasta2015-04-17 16:15 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_aJ8XflD.full_MSA.fasta.noGaps.html2015-04-17 16:15 496KFull MSA before JPred filters in FASTA
[TXT]jp_aJ8XflD.full_MSA.fasta.withGaps.html2015-04-17 16:15 5.9MFull MSA before JPred filters in FASTA
[ ]jp_aJ8XflD.hmm2015-04-17 16:15 52KHHMer2 profile of the alignment
[TXT]jp_aJ8XflD.html2015-04-17 16:15 285KHTML prediction and alignment data
[ ]jp_aJ8XflD.input2015-04-17 15:52 283 Raw input data for analysis
[ ]jp_aJ8XflD.jalview2015-04-17 16:15 6.4KJalview annotation file for alignment
[ ]jp_aJ8XflD.jnet2015-04-17 16:15 10KJnet secondary structure output
[TXT]jp_aJ8XflD.profile2015-04-17 16:13 44KPSIBLAST profile from alignment
[ ]jp_aJ8XflD.pssm2015-04-17 16:15 59KPSIBLAST PSSM for Jnet
[TXT]jp_aJ8XflD.results.html2016-02-15 12:21 121KJPred results page
[TXT]jp_aJ8XflD.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_aJ8XflD.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_aJ8XflD.seq2015-04-17 15:52 292 Sequence data file
[TXT]jp_aJ8XflD.simple.html2015-04-17 16:15 1.9KBrief HTML: sequence and prediction only
[TXT]jp_aJ8XflD.svg.html2015-04-17 16:15 112KJalview SVG summary of results
[ ]jp_aJ8XflD.tar.gz2015-04-17 16:15 3.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.