JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4fioa_.name2015-04-17 17:07 0 Job name flag file
[ ]jp_i9xoWwi.align2015-04-17 18:15 47KPSIBLAST alignment in FASTA format
[TXT]jp_i9xoWwi.als2015-04-17 18:15 5.4KAlscript command file for PS/PDF output
[ ]jp_i9xoWwi.blast.gz2015-04-17 18:15 140KCompressed PSIBLAST output file
[TXT]jp_i9xoWwi.coils.csv2015-04-17 18:15 1.9KCOILS output in CSV format
[ ]jp_i9xoWwi.coilseq.lupas_142015-04-17 18:15 13KCOILS output, window length 14
[ ]jp_i9xoWwi.coilseq.lupas_212015-04-17 18:15 13KCOILS output, window length 21
[ ]jp_i9xoWwi.coilseq.lupas_282015-04-17 18:15 13KCOILS output, window length 28
[ ]jp_i9xoWwi.concise2015-04-17 18:15 106KPrediction: coiled-coil, solvent, alignment
[ ]jp_i9xoWwi.concise.blc2015-04-17 18:15 51KBLC format prediction and alignment data
[ ]jp_i9xoWwi.concise.fasta2015-04-17 18:15 51KPrediction: coiled-coil, solvent, alignment
[ ]jp_i9xoWwi.concise.pdf2015-04-17 18:15 365KPDF prediction and alignment data
[ ]jp_i9xoWwi.concise.ps2015-04-17 18:15 6.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_i9xoWwi.fasta2015-04-17 18:09 338 Input query sequence in FASTA format
[ ]jp_i9xoWwi.full_MSA.fasta2015-04-17 18:15 126KFull MSA before JPred filters in FASTA
[TXT]jp_i9xoWwi.full_MSA.fasta.noGaps.html2015-04-17 18:15 131KFull MSA before JPred filters in FASTA
[TXT]jp_i9xoWwi.full_MSA.fasta.withGaps.html2015-04-17 18:15 401KFull MSA before JPred filters in FASTA
[ ]jp_i9xoWwi.hmm2015-04-17 18:15 60KHHMer2 profile of the alignment
[TXT]jp_i9xoWwi.html2015-04-17 18:15 108KHTML prediction and alignment data
[ ]jp_i9xoWwi.input2015-04-17 17:07 328 Raw input data for analysis
[ ]jp_i9xoWwi.jalview2015-04-17 18:15 7.3KJalview annotation file for alignment
[ ]jp_i9xoWwi.jnet2015-04-17 18:15 12KJnet secondary structure output
[TXT]jp_i9xoWwi.profile2015-04-17 18:13 51KPSIBLAST profile from alignment
[ ]jp_i9xoWwi.pssm2015-04-17 18:15 69KPSIBLAST PSSM for Jnet
[TXT]jp_i9xoWwi.results.html2016-02-15 12:21 140KJPred results page
[TXT]jp_i9xoWwi.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_i9xoWwi.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_i9xoWwi.seq2015-04-17 17:07 338 Sequence data file
[TXT]jp_i9xoWwi.simple.html2015-04-17 18:15 2.2KBrief HTML: sequence and prediction only
[TXT]jp_i9xoWwi.svg.html2015-04-17 18:15 132KJalview SVG summary of results
[ ]jp_i9xoWwi.tar.gz2015-04-17 18:15 729KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.