JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:19 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4g3na_.name2015-04-17 17:07 0 Job name flag file
[ ]jp_ojzWo5r.align2015-04-17 18:17 275KPSIBLAST alignment in FASTA format
[TXT]jp_ojzWo5r.als2015-04-17 18:17 5.0KAlscript command file for PS/PDF output
[ ]jp_ojzWo5r.blast.gz2015-04-17 18:15 16MCompressed PSIBLAST output file
[TXT]jp_ojzWo5r.coils.csv2015-04-17 18:17 1.8KCOILS output in CSV format
[ ]jp_ojzWo5r.coilseq.lupas_142015-04-17 18:17 13KCOILS output, window length 14
[ ]jp_ojzWo5r.coilseq.lupas_212015-04-17 18:17 13KCOILS output, window length 21
[ ]jp_ojzWo5r.coilseq.lupas_282015-04-17 18:17 13KCOILS output, window length 28
[ ]jp_ojzWo5r.concise2015-04-17 18:17 547KPrediction: coiled-coil, solvent, alignment
[ ]jp_ojzWo5r.concise.blc2015-04-17 18:17 276KBLC format prediction and alignment data
[ ]jp_ojzWo5r.concise.fasta2015-04-17 18:17 278KPrediction: coiled-coil, solvent, alignment
[ ]jp_ojzWo5r.concise.pdf2015-04-17 18:18 1.8MPDF prediction and alignment data
[ ]jp_ojzWo5r.concise.ps2015-04-17 18:17 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_ojzWo5r.fasta2015-04-17 18:09 319 Input query sequence in FASTA format
[ ]jp_ojzWo5r.full_MSA.fasta2015-04-17 18:16 29MFull MSA before JPred filters in FASTA
[TXT]jp_ojzWo5r.full_MSA.fasta.noGaps.html2015-04-17 18:19 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_ojzWo5r.full_MSA.fasta.withGaps.html2015-04-17 18:19 72MFull MSA before JPred filters in FASTA
[ ]jp_ojzWo5r.hmm2015-04-17 18:17 57KHHMer2 profile of the alignment
[TXT]jp_ojzWo5r.html2015-04-17 18:17 464KHTML prediction and alignment data
[ ]jp_ojzWo5r.input2015-04-17 17:07 309 Raw input data for analysis
[ ]jp_ojzWo5r.jalview2015-04-17 18:17 6.8KJalview annotation file for alignment
[ ]jp_ojzWo5r.jnet2015-04-17 18:17 11KJnet secondary structure output
[TXT]jp_ojzWo5r.profile2015-04-17 18:14 48KPSIBLAST profile from alignment
[ ]jp_ojzWo5r.pssm2015-04-17 18:17 65KPSIBLAST PSSM for Jnet
[TXT]jp_ojzWo5r.results.html2016-02-15 12:21 129KJPred results page
[TXT]jp_ojzWo5r.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_ojzWo5r.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_ojzWo5r.seq2015-04-17 17:07 319 Sequence data file
[TXT]jp_ojzWo5r.simple.html2015-04-17 18:17 2.1KBrief HTML: sequence and prediction only
[TXT]jp_ojzWo5r.svg.html2015-04-17 18:19 121KJalview SVG summary of results
[ ]jp_ojzWo5r.tar.gz2015-04-17 18:19 26MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.