JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:54 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4gwba_.name2015-04-17 17:07 0 Job name flag file
[ ]jp_f5qZV0H.align2015-04-17 18:53 163KPSIBLAST alignment in FASTA format
[TXT]jp_f5qZV0H.als2015-04-17 18:53 2.8KAlscript command file for PS/PDF output
[ ]jp_f5qZV0H.blast.gz2015-04-17 18:52 4.9MCompressed PSIBLAST output file
[TXT]jp_f5qZV0H.coils.csv2015-04-17 18:53 1.0KCOILS output in CSV format
[ ]jp_f5qZV0H.coilseq.lupas_142015-04-17 18:53 6.9KCOILS output, window length 14
[ ]jp_f5qZV0H.coilseq.lupas_212015-04-17 18:53 6.9KCOILS output, window length 21
[ ]jp_f5qZV0H.coilseq.lupas_282015-04-17 18:53 6.9KCOILS output, window length 28
[ ]jp_f5qZV0H.concise2015-04-17 18:53 320KPrediction: coiled-coil, solvent, alignment
[ ]jp_f5qZV0H.concise.blc2015-04-17 18:53 163KBLC format prediction and alignment data
[ ]jp_f5qZV0H.concise.fasta2015-04-17 18:53 165KPrediction: coiled-coil, solvent, alignment
[ ]jp_f5qZV0H.concise.pdf2015-04-17 18:54 1.0MPDF prediction and alignment data
[ ]jp_f5qZV0H.concise.ps2015-04-17 18:53 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_f5qZV0H.fasta2015-04-17 18:09 179 Input query sequence in FASTA format
[ ]jp_f5qZV0H.full_MSA.fasta2015-04-17 18:52 7.9MFull MSA before JPred filters in FASTA
[TXT]jp_f5qZV0H.full_MSA.fasta.noGaps.html2015-04-17 18:54 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_f5qZV0H.full_MSA.fasta.withGaps.html2015-04-17 18:54 26MFull MSA before JPred filters in FASTA
[ ]jp_f5qZV0H.hmm2015-04-17 18:53 31KHHMer2 profile of the alignment
[TXT]jp_f5qZV0H.html2015-04-17 18:53 351KHTML prediction and alignment data
[ ]jp_f5qZV0H.input2015-04-17 17:07 171 Raw input data for analysis
[ ]jp_f5qZV0H.jalview2015-04-17 18:53 4.1KJalview annotation file for alignment
[ ]jp_f5qZV0H.jnet2015-04-17 18:53 6.0KJnet secondary structure output
[TXT]jp_f5qZV0H.profile2015-04-17 18:40 26KPSIBLAST profile from alignment
[ ]jp_f5qZV0H.pssm2015-04-17 18:53 35KPSIBLAST PSSM for Jnet
[TXT]jp_f5qZV0H.results.html2016-02-15 12:21 75KJPred results page
[TXT]jp_f5qZV0H.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_f5qZV0H.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_f5qZV0H.seq2015-04-17 17:07 179 Sequence data file
[TXT]jp_f5qZV0H.simple.html2015-04-17 18:53 1.5KBrief HTML: sequence and prediction only
[TXT]jp_f5qZV0H.svg.html2015-04-17 18:54 67KJalview SVG summary of results
[ ]jp_f5qZV0H.tar.gz2015-04-17 18:54 8.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.