JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:50 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4h27a_.name2015-04-17 19:34 0 Job name flag file
[ ]jp_jq_E3sU.align2015-04-17 22:48 285KPSIBLAST alignment in FASTA format
[TXT]jp_jq_E3sU.als2015-04-17 22:48 4.6KAlscript command file for PS/PDF output
[ ]jp_jq_E3sU.blast.gz2015-04-17 22:44 23MCompressed PSIBLAST output file
[TXT]jp_jq_E3sU.coils.csv2015-04-17 22:48 1.9KCOILS output in CSV format
[ ]jp_jq_E3sU.coilseq.lupas_142015-04-17 22:48 13KCOILS output, window length 14
[ ]jp_jq_E3sU.coilseq.lupas_212015-04-17 22:48 13KCOILS output, window length 21
[ ]jp_jq_E3sU.coilseq.lupas_282015-04-17 22:48 13KCOILS output, window length 28
[ ]jp_jq_E3sU.concise2015-04-17 22:48 566KPrediction: coiled-coil, solvent, alignment
[ ]jp_jq_E3sU.concise.blc2015-04-17 22:48 285KBLC format prediction and alignment data
[ ]jp_jq_E3sU.concise.fasta2015-04-17 22:48 288KPrediction: coiled-coil, solvent, alignment
[ ]jp_jq_E3sU.concise.pdf2015-04-17 22:49 2.1MPDF prediction and alignment data
[ ]jp_jq_E3sU.concise.ps2015-04-17 22:48 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_jq_E3sU.fasta2015-04-17 22:18 335 Input query sequence in FASTA format
[ ]jp_jq_E3sU.full_MSA.fasta2015-04-17 22:47 41MFull MSA before JPred filters in FASTA
[TXT]jp_jq_E3sU.full_MSA.fasta.noGaps.html2015-04-17 22:50 4.3MFull MSA before JPred filters in FASTA
[TXT]jp_jq_E3sU.full_MSA.fasta.withGaps.html2015-04-17 22:50 108MFull MSA before JPred filters in FASTA
[ ]jp_jq_E3sU.hmm2015-04-17 22:48 60KHHMer2 profile of the alignment
[TXT]jp_jq_E3sU.html2015-04-17 22:48 476KHTML prediction and alignment data
[ ]jp_jq_E3sU.input2015-04-17 19:34 325 Raw input data for analysis
[ ]jp_jq_E3sU.jalview2015-04-17 22:48 7.2KJalview annotation file for alignment
[ ]jp_jq_E3sU.jnet2015-04-17 22:48 12KJnet secondary structure output
[TXT]jp_jq_E3sU.profile2015-04-17 22:42 51KPSIBLAST profile from alignment
[ ]jp_jq_E3sU.pssm2015-04-17 22:48 68KPSIBLAST PSSM for Jnet
[TXT]jp_jq_E3sU.results.html2016-02-15 12:21 137KJPred results page
[TXT]jp_jq_E3sU.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_jq_E3sU.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_jq_E3sU.seq2015-04-17 19:34 335 Sequence data file
[TXT]jp_jq_E3sU.simple.html2015-04-17 22:48 2.1KBrief HTML: sequence and prediction only
[TXT]jp_jq_E3sU.svg.html2015-04-17 22:50 129KJalview SVG summary of results
[ ]jp_jq_E3sU.tar.gz2015-04-17 22:50 38MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.