JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4h6ca_.name2015-04-17 17:44 0 Job name flag file
[ ]jp_hAPqXB4.align2015-04-17 19:14 13KPSIBLAST alignment in FASTA format
[TXT]jp_hAPqXB4.als2015-04-17 19:14 2.8KAlscript command file for PS/PDF output
[ ]jp_hAPqXB4.blast.gz2015-04-17 19:14 43KCompressed PSIBLAST output file
[TXT]jp_hAPqXB4.coils.csv2015-04-17 19:14 1.1KCOILS output in CSV format
[ ]jp_hAPqXB4.coilseq.lupas_142015-04-17 19:14 7.6KCOILS output, window length 14
[ ]jp_hAPqXB4.coilseq.lupas_212015-04-17 19:14 7.6KCOILS output, window length 21
[ ]jp_hAPqXB4.coilseq.lupas_282015-04-17 19:14 7.6KCOILS output, window length 28
[ ]jp_hAPqXB4.concise2015-04-17 19:14 32KPrediction: coiled-coil, solvent, alignment
[ ]jp_hAPqXB4.concise.blc2015-04-17 19:14 15KBLC format prediction and alignment data
[ ]jp_hAPqXB4.concise.fasta2015-04-17 19:14 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_hAPqXB4.concise.pdf2015-04-17 19:14 90KPDF prediction and alignment data
[ ]jp_hAPqXB4.concise.ps2015-04-17 19:14 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_hAPqXB4.fasta2015-04-17 19:09 195 Input query sequence in FASTA format
[ ]jp_hAPqXB4.full_MSA.fasta2015-04-17 19:14 58KFull MSA before JPred filters in FASTA
[TXT]jp_hAPqXB4.full_MSA.fasta.noGaps.html2015-04-17 19:14 46KFull MSA before JPred filters in FASTA
[TXT]jp_hAPqXB4.full_MSA.fasta.withGaps.html2015-04-17 19:14 265KFull MSA before JPred filters in FASTA
[ ]jp_hAPqXB4.hmm2015-04-17 19:14 34KHHMer2 profile of the alignment
[TXT]jp_hAPqXB4.html2015-04-17 19:14 41KHTML prediction and alignment data
[ ]jp_hAPqXB4.input2015-04-17 17:44 187 Raw input data for analysis
[ ]jp_hAPqXB4.jalview2015-04-17 19:14 4.4KJalview annotation file for alignment
[ ]jp_hAPqXB4.jnet2015-04-17 19:14 6.6KJnet secondary structure output
[TXT]jp_hAPqXB4.profile2015-04-17 19:13 29KPSIBLAST profile from alignment
[ ]jp_hAPqXB4.pssm2015-04-17 19:14 39KPSIBLAST PSSM for Jnet
[TXT]jp_hAPqXB4.results.html2016-02-15 12:21 80KJPred results page
[TXT]jp_hAPqXB4.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_hAPqXB4.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_hAPqXB4.seq2015-04-17 17:44 195 Sequence data file
[TXT]jp_hAPqXB4.simple.html2015-04-17 19:14 1.5KBrief HTML: sequence and prediction only
[TXT]jp_hAPqXB4.svg.html2015-04-17 19:15 72KJalview SVG summary of results
[ ]jp_hAPqXB4.tar.gz2015-04-17 19:15 215KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.