JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4i6ya2.name2015-04-17 15:53 0 Job name flag file
[ ]jp_qMgDzEm.align2015-04-17 16:15 60KPSIBLAST alignment in FASTA format
[TXT]jp_qMgDzEm.als2015-04-17 16:15 2.1KAlscript command file for PS/PDF output
[ ]jp_qMgDzEm.blast.gz2015-04-17 16:15 238KCompressed PSIBLAST output file
[TXT]jp_qMgDzEm.coils.csv2015-04-17 16:15 690 COILS output in CSV format
[ ]jp_qMgDzEm.coilseq.lupas_142015-04-17 16:15 4.6KCOILS output, window length 14
[ ]jp_qMgDzEm.coilseq.lupas_212015-04-17 16:15 4.6KCOILS output, window length 21
[ ]jp_qMgDzEm.coilseq.lupas_282015-04-17 16:15 4.6KCOILS output, window length 28
[ ]jp_qMgDzEm.concise2015-04-17 16:15 118KPrediction: coiled-coil, solvent, alignment
[ ]jp_qMgDzEm.concise.blc2015-04-17 16:15 61KBLC format prediction and alignment data
[ ]jp_qMgDzEm.concise.fasta2015-04-17 16:15 61KPrediction: coiled-coil, solvent, alignment
[ ]jp_qMgDzEm.concise.pdf2015-04-17 16:15 396KPDF prediction and alignment data
[ ]jp_qMgDzEm.concise.ps2015-04-17 16:15 7.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_qMgDzEm.fasta2015-04-17 16:10 124 Input query sequence in FASTA format
[ ]jp_qMgDzEm.full_MSA.fasta2015-04-17 16:15 310KFull MSA before JPred filters in FASTA
[TXT]jp_qMgDzEm.full_MSA.fasta.noGaps.html2015-04-17 16:15 161KFull MSA before JPred filters in FASTA
[TXT]jp_qMgDzEm.full_MSA.fasta.withGaps.html2015-04-17 16:15 1.1MFull MSA before JPred filters in FASTA
[ ]jp_qMgDzEm.hmm2015-04-17 16:15 21KHHMer2 profile of the alignment
[TXT]jp_qMgDzEm.html2015-04-17 16:15 164KHTML prediction and alignment data
[ ]jp_qMgDzEm.input2015-04-17 15:53 117 Raw input data for analysis
[ ]jp_qMgDzEm.jalview2015-04-17 16:15 3.1KJalview annotation file for alignment
[ ]jp_qMgDzEm.jnet2015-04-17 16:15 4.1KJnet secondary structure output
[TXT]jp_qMgDzEm.profile2015-04-17 16:13 18KPSIBLAST profile from alignment
[ ]jp_qMgDzEm.pssm2015-04-17 16:15 24KPSIBLAST PSSM for Jnet
[TXT]jp_qMgDzEm.results.html2016-02-15 12:21 53KJPred results page
[TXT]jp_qMgDzEm.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_qMgDzEm.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_qMgDzEm.seq2015-04-17 15:53 124 Sequence data file
[TXT]jp_qMgDzEm.simple.html2015-04-17 16:15 1.2KBrief HTML: sequence and prediction only
[TXT]jp_qMgDzEm.svg.html2015-04-17 16:15 45KJalview SVG summary of results
[ ]jp_qMgDzEm.tar.gz2015-04-17 16:15 870KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.