JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:29 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4i7ea_.name2015-04-17 19:34 0 Job name flag file
[ ]jp_qbL0klr.align2015-04-17 22:28 269KPSIBLAST alignment in FASTA format
[TXT]jp_qbL0klr.als2015-04-17 22:28 4.8KAlscript command file for PS/PDF output
[ ]jp_qbL0klr.blast.gz2015-04-17 22:25 15MCompressed PSIBLAST output file
[TXT]jp_qbL0klr.coils.csv2015-04-17 22:28 1.9KCOILS output in CSV format
[ ]jp_qbL0klr.coilseq.lupas_142015-04-17 22:28 13KCOILS output, window length 14
[ ]jp_qbL0klr.coilseq.lupas_212015-04-17 22:28 13KCOILS output, window length 21
[ ]jp_qbL0klr.coilseq.lupas_282015-04-17 22:28 13KCOILS output, window length 28
[ ]jp_qbL0klr.concise2015-04-17 22:28 537KPrediction: coiled-coil, solvent, alignment
[ ]jp_qbL0klr.concise.blc2015-04-17 22:28 270KBLC format prediction and alignment data
[ ]jp_qbL0klr.concise.fasta2015-04-17 22:28 273KPrediction: coiled-coil, solvent, alignment
[ ]jp_qbL0klr.concise.pdf2015-04-17 22:28 1.9MPDF prediction and alignment data
[ ]jp_qbL0klr.concise.ps2015-04-17 22:28 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_qbL0klr.fasta2015-04-17 22:18 336 Input query sequence in FASTA format
[ ]jp_qbL0klr.full_MSA.fasta2015-04-17 22:27 30MFull MSA before JPred filters in FASTA
[TXT]jp_qbL0klr.full_MSA.fasta.noGaps.html2015-04-17 22:29 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_qbL0klr.full_MSA.fasta.withGaps.html2015-04-17 22:29 69MFull MSA before JPred filters in FASTA
[ ]jp_qbL0klr.hmm2015-04-17 22:28 60KHHMer2 profile of the alignment
[TXT]jp_qbL0klr.html2015-04-17 22:28 456KHTML prediction and alignment data
[ ]jp_qbL0klr.input2015-04-17 19:34 326 Raw input data for analysis
[ ]jp_qbL0klr.jalview2015-04-17 22:28 7.3KJalview annotation file for alignment
[ ]jp_qbL0klr.jnet2015-04-17 22:28 12KJnet secondary structure output
[TXT]jp_qbL0klr.profile2015-04-17 22:23 51KPSIBLAST profile from alignment
[ ]jp_qbL0klr.pssm2015-04-17 22:28 69KPSIBLAST PSSM for Jnet
[TXT]jp_qbL0klr.results.html2016-02-15 12:21 138KJPred results page
[TXT]jp_qbL0klr.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_qbL0klr.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_qbL0klr.seq2015-04-17 19:34 336 Sequence data file
[TXT]jp_qbL0klr.simple.html2015-04-17 22:28 2.1KBrief HTML: sequence and prediction only
[TXT]jp_qbL0klr.svg.html2015-04-17 22:29 130KJalview SVG summary of results
[ ]jp_qbL0klr.tar.gz2015-04-17 22:29 24MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.