JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4i8ha_.name2015-04-17 16:31 0 Job name flag file
[ ]jp_79YhS2Y.align2015-04-17 18:10 202KPSIBLAST alignment in FASTA format
[TXT]jp_79YhS2Y.als2015-04-17 18:10 3.0KAlscript command file for PS/PDF output
[ ]jp_79YhS2Y.blast.gz2015-04-17 18:06 23MCompressed PSIBLAST output file
[TXT]jp_79YhS2Y.coils.csv2015-04-17 18:10 1.3KCOILS output in CSV format
[ ]jp_79YhS2Y.coilseq.lupas_142015-04-17 18:10 9.4KCOILS output, window length 14
[ ]jp_79YhS2Y.coilseq.lupas_212015-04-17 18:10 9.4KCOILS output, window length 21
[ ]jp_79YhS2Y.coilseq.lupas_282015-04-17 18:10 9.4KCOILS output, window length 28
[ ]jp_79YhS2Y.concise2015-04-17 18:10 398KPrediction: coiled-coil, solvent, alignment
[ ]jp_79YhS2Y.concise.blc2015-04-17 18:10 202KBLC format prediction and alignment data
[ ]jp_79YhS2Y.concise.fasta2015-04-17 18:10 204KPrediction: coiled-coil, solvent, alignment
[ ]jp_79YhS2Y.concise.pdf2015-04-17 18:10 1.4MPDF prediction and alignment data
[ ]jp_79YhS2Y.concise.ps2015-04-17 18:10 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_79YhS2Y.fasta2015-04-17 17:08 239 Input query sequence in FASTA format
[ ]jp_79YhS2Y.full_MSA.fasta2015-04-17 18:08 41MFull MSA before JPred filters in FASTA
[TXT]jp_79YhS2Y.full_MSA.fasta.noGaps.html2015-04-17 18:12 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_79YhS2Y.full_MSA.fasta.withGaps.html2015-04-17 18:12 96MFull MSA before JPred filters in FASTA
[ ]jp_79YhS2Y.hmm2015-04-17 18:10 42KHHMer2 profile of the alignment
[TXT]jp_79YhS2Y.html2015-04-17 18:10 379KHTML prediction and alignment data
[ ]jp_79YhS2Y.input2015-04-17 16:31 230 Raw input data for analysis
[ ]jp_79YhS2Y.jalview2015-04-17 18:10 5.2KJalview annotation file for alignment
[ ]jp_79YhS2Y.jnet2015-04-17 18:10 8.2KJnet secondary structure output
[TXT]jp_79YhS2Y.profile2015-04-17 17:49 36KPSIBLAST profile from alignment
[ ]jp_79YhS2Y.pssm2015-04-17 18:10 48KPSIBLAST PSSM for Jnet
[TXT]jp_79YhS2Y.results.html2016-02-15 12:21 96KJPred results page
[TXT]jp_79YhS2Y.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_79YhS2Y.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_79YhS2Y.seq2015-04-17 16:31 239 Sequence data file
[TXT]jp_79YhS2Y.simple.html2015-04-17 18:10 1.6KBrief HTML: sequence and prediction only
[TXT]jp_79YhS2Y.svg.html2015-04-17 18:12 88KJalview SVG summary of results
[ ]jp_79YhS2Y.tar.gz2015-04-17 18:12 35MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.